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qs_2_scaffold_2487

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_2487_1
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3..497)
DNA (495bp) protein (165aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
lipA; lipoyl synthase (EC:2.8.1.-)
Lipoyl synthase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DW62_9EURY
qs_2_scaffold_2487_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(575..1336)
DNA (762bp) protein (254aa)
Twin arginine translocation system subunit TatC n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNN2_NATM8
tatC1; twin arginine translocation system subunit TatC
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" sourc
qs_2_scaffold_2487_3
unknown

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comp(1454..2734)
DNA (1281bp) protein (427aa)

This feature has no annotations

qs_2_scaffold_2487_4
unknown

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comp(2822..3127)
DNA (306bp) protein (102aa)

This feature has no annotations

qs_2_scaffold_2487_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3316..3639
DNA (324bp) protein (108aa)
Twin arginine translocation system subunit TatC n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XZE0_NATM8
tatC2; twin arginine translocation system subunit TatC
Sec-independent protein translocase subunit TatC {ECO:0000313|EMBL:CCQ35531.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="N
qs_2_scaffold_2487_6
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3778..3954
DNA (177bp) protein (59aa)
Transcription regulator n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FGP9_9EURY
Transcription regulator {ECO:0000313|EMBL:EMA61643.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;
hypothetical protein
qs_2_scaffold_2487_7
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3947..4663
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5Y8_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ13794.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_2_scaffold_2487_8
unknown

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4700..4918
DNA (219bp) protein (73aa)

This feature has no annotations

qs_2_scaffold_2487_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4915..5352)
DNA (438bp) protein (146aa)
rlmE; 23S rRNA (uridine-2'-O-) methyltransferase (EC:2.1.1.166)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTZ7_NATM8
qs_2_scaffold_2487_10
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5337..5675)
DNA (339bp) protein (113aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Halonotius sp. J07HN6 RepID=U1NV10_9EURY
ribosomal RNA methyltransferase
qs_2_scaffold_2487_11
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5917..6303)
DNA (387bp) protein (129aa)
hypothetical protein id=24613505 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:KDS92135.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
qs_2_scaffold_2487_12
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6369..6938
DNA (570bp) protein (190aa)
Phosphate transporter n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XYI6_9EURY
Phosphate transporter {ECO:0000313|EMBL:ELY66486.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 18795
phosphate transporter
qs_2_scaffold_2487_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7025..7423
DNA (399bp) protein (133aa)
Transcription regulator n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QT02_9EURY
Transcription regulator {ECO:0000313|EMBL:EFW92283.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_2_scaffold_2487_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7671..8375
DNA (705bp) protein (235aa)
Putative nucleoside-diphosphate-sugar epimerase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PKB6_9EURY
Putative nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ERH10871.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
3-beta hydroxysteroid dehydrogenase
qs_2_scaffold_2487_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8441..9865
DNA (1425bp) protein (475aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Dihydrolipoyl dehydrogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4Q9_9EURY
dihydrolipoamide dehydrogenase
qs_2_scaffold_2487_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9992..10486)
DNA (495bp) protein (165aa)
rpiA; ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A {ECO:0000255|HAMAP-Rule:MF_00170}; EC=5.3.1.6 {ECO:0000255|HAMAP-Rule:MF_00170};; Phosphoriboisomerase A {ECO:0000255|HAMAP-Rule:MF_00170}; Short=PRI {ECO:0000255|HAMAP-
Ribose-5-phosphate isomerase A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RPIA_NATPD
Displaying 16 items

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