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qs_3_scaffold_101

Search features with annotation key words

Displaying items 1-30 of 50 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_101_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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215..1195
DNA (981bp) protein (327aa)
Integrase family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MSR9_9EURY
Integrase family protein {ECO:0000313|EMBL:EMA48398.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis J
integrase family protein
qs_3_scaffold_101_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1173..1367
DNA (195bp) protein (65aa)
Integrase family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NEB4_9EURY
Integrase family protein {ECO:0000313|EMBL:EMA54995.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis J
integrase family protein
qs_3_scaffold_101_3
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1744..2664
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LF37_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA32207.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
qs_3_scaffold_101_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2733..3974)
DNA (1242bp) protein (414aa)
D-xylonate dehydratase n=1 Tax=Halogranum salarium B-1 RepID=J2ZX61_9EURY
D-xylonate dehydratase {ECO:0000313|EMBL:EJN57623.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
D-gluconate dehydratase
qs_3_scaffold_101_5

Not on your lists

4571..5425
DNA (855bp) protein (285aa)
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.7.99.5)
5,10-methylenetetrahydrofolate reductase n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZVI8_9ARCH
5,10-methylenetetrahydrofolate reductase {ECO:0000313|EMBL:ESS06930.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
qs_3_scaffold_101_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5523..6530
DNA (1008bp) protein (336aa)
oadhA3; 2-oxoacid dehydrogenase E1 component subunit alpha (EC:1.2.4.-)
2-oxoacid dehydrogenase E1 component alpha subunit n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVV4_9EURY
2-oxoacid dehydrogenase E1 component alpha subunit {ECO:0000313|EMBL:EFW91367.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source=
qs_3_scaffold_101_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6533..7534
DNA (1002bp) protein (334aa)
Transketolase central subunit n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NCS6_9EURY
Transketolase central subunit {ECO:0000313|EMBL:EMA55782.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailanden
transketolase
qs_3_scaffold_101_8
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7725..8036
DNA (312bp) protein (104aa)
3-oxoacyl-ACP reductase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PJ73_9EURY
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EMA70077.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
dehydrogenase
qs_3_scaffold_101_9
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8049..8411
DNA (363bp) protein (121aa)
3-oxoacyl-ACP reductase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PJ73_9EURY
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EMA70077.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
short-chain dehydrogenase/reductase SDR
qs_3_scaffold_101_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8573..9550
DNA (978bp) protein (326aa)
Aldo/keto reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CBL2_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:ELZ20620.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
aldo/keto reductase
qs_3_scaffold_101_11
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9796..10572
DNA (777bp) protein (259aa)
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9WB24_9EURY
3-ketoacyl-ACP reductase
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:AHF98400.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48
qs_3_scaffold_101_12

Not on your lists

10670..11029
DNA (360bp) protein (120aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetra
pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase id=5799732 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
qs_3_scaffold_101_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11158..12012
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TSI9_9EURY
5,10-methylenetetrahydrofolate reductase {ECO:0000313|EMBL:EMA48867.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
methylenetetrahydrofolate reductase
qs_3_scaffold_101_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12154..13404
DNA (1251bp) protein (417aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH2_9EURY
qs_3_scaffold_101_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13486..15063)
DNA (1578bp) protein (526aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Halogranum salarium B-1 RepID=J3EW99_9EURY
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:EJN59107.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium
rbsB-2; sugar ABC transporter substrate binding protein
qs_3_scaffold_101_16
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15660..16841
DNA (1182bp) protein (394aa)
glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20)
Glycerol-3-phosphate-transporting ATPase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BWW8_9EURY
Glycerol-3-phosphate-transporting ATPase {ECO:0000313|EMBL:ELZ15496.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
qs_3_scaffold_101_17
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17018..17497)
DNA (480bp) protein (160aa)
Cytidine deaminase family enzyme blasticidin S deaminase n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0SY11_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL74333.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
qs_3_scaffold_101_18
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17588..18688)
DNA (1101bp) protein (367aa)
Oxidoreductase domain-containing protein n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0B641_NATA1
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:ELZ05977.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica
hypothetical protein
qs_3_scaffold_101_19
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18912..19880)
DNA (969bp) protein (323aa)
AP-endonuclease/AP-lyase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZF5_9EURY
AP-endonuclease/AP-lyase {ECO:0000313|EMBL:EFW90076.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophi
xylose isomerase
qs_3_scaffold_101_20
unknown

Not on your lists

19941..20201
DNA (261bp) protein (87aa)

This feature has no annotations

qs_3_scaffold_101_21
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20078..20998)
DNA (921bp) protein (307aa)
ABC transporter integral membrane subunit n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BYN1_9EURY
sugar ABC transporter permease
Sugar ABC transporter permease {ECO:0000313|EMBL:AHG01413.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii
qs_3_scaffold_101_22
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21000..21986)
DNA (987bp) protein (329aa)
Sugar ABC transporter permease n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CUQ4_9EURY
Sugar ABC transporter permease {ECO:0000313|EMBL:ELZ26137.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pal
ABC transporter integral membrane subunit
qs_3_scaffold_101_23
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22220..23479
DNA (1260bp) protein (420aa)
Betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PJI2_9EURY
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:EMA70073.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 1
qs_3_scaffold_101_24
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23424..23720
DNA (297bp) protein (99aa)
Betaine-aldehyde dehydrogenase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PJI2_9EURY
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:EMA70073.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 1
aldehyde dehydrogenase
qs_3_scaffold_101_25
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23976..25394
DNA (1419bp) protein (473aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXQ6_9EURY
qs_3_scaffold_101_26
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25485..26891)
DNA (1407bp) protein (469aa)
Dihydrolipoamide S-acyltransferase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WRP5_9EURY
Dihydrolipoamide S-acyltransferase {ECO:0000313|EMBL:ELY52159.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotg
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component
qs_3_scaffold_101_27
unknown

Not on your lists

27120..27242
DNA (123bp) protein (41aa)

This feature has no annotations

qs_3_scaffold_101_28
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27470..28459
DNA (990bp) protein (330aa)
Mandelate racemase/muconate lactonizing-like protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PMV4_9EURY
Mandelate racemase/muconate lactonizing-like protein {ECO:0000313|EMBL:EMA70070.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
mandelate racemase/muconate lactonizing-like protein
qs_3_scaffold_101_29
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28472..29368
DNA (897bp) protein (299aa)
NAD/NADP octopine/nopaline dehydrogenase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PJ33_9EURY
NAD/NADP octopine/nopaline dehydrogenase {ECO:0000313|EMBL:EMA70071.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum koc
NAD/NADP octopine/nopaline dehydrogenase
qs_3_scaffold_101_30
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30093..30851
DNA (759bp) protein (253aa)
ArcR family transcription regulator n=1 Tax=Halogranum salarium B-1 RepID=J3JE07_9EURY
ArcR family transcription regulator {ECO:0000313|EMBL:EJN57949.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
IclR family transcriptional regulator
Displaying items 1-30 of 50 in total

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