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qs_3_scaffold_125

Search features with annotation key words

Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_125_1
unknown

Not on your lists

comp(3..158)
DNA (156bp) protein (52aa)

This feature has no annotations

qs_3_scaffold_125_2
unknown

Not on your lists

206..388
DNA (183bp) protein (61aa)

This feature has no annotations

qs_3_scaffold_125_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

385..1293
DNA (909bp) protein (303aa)
Dihydrodipicolinate synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI08_9EURY
Dihydrodipicolinate synthase {ECO:0000313|EMBL:EMA44973.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
dihydrodipicolinate synthase/N-acetylneuraminate lyase
qs_3_scaffold_125_4
unknown

Not on your lists

comp(1332..1799)
DNA (468bp) protein (156aa)

This feature has no annotations

qs_3_scaffold_125_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1981..2658)
DNA (678bp) protein (226aa)
PyrE-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSQ0_9EURY
PyrE-like protein {ECO:0000256|HAMAP-Rule:MF_01214}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6
orotate phosphoribosyltransferase-like protein
qs_3_scaffold_125_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2748..3386)
DNA (639bp) protein (213aa)
HAD-superfamily hydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAN9_9EURY
HAD-superfamily hydrolase {ECO:0000313|EMBL:EMA53725.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
HAD-superfamily hydrolase
qs_3_scaffold_125_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3572..4936
DNA (1365bp) protein (455aa)
Cytochrome P450 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQM1_NATM8
cyc1; cytochrome P450
Cytochrome P450 {ECO:0000313|EMBL:CCQ36470.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strain D
qs_3_scaffold_125_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5009..5563)
DNA (555bp) protein (185aa)
hypothetical protein; K06940 id=24646468 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10643.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_3_scaffold_125_9
unknown

Not on your lists

comp(5775..6122)
DNA (348bp) protein (116aa)

This feature has no annotations

qs_3_scaffold_125_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6257..6577)
DNA (321bp) protein (107aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
DNA-directed RNA polymerase subunit n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4D5_9EURY
tfs2; transcription elongation factor TFS
qs_3_scaffold_125_11
unknown

Not on your lists

6813..7034
DNA (222bp) protein (74aa)

This feature has no annotations

qs_3_scaffold_125_12
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7125..7421)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3C1_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15228.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_3_scaffold_125_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7559..8392)
DNA (834bp) protein (278aa)
Homolog to KaiC-like transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMU9_NATPD
KaiC-like transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:CAI50557.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_3_scaffold_125_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8418..9338)
DNA (921bp) protein (307aa)
Beta-rfap synthase n=3 Tax=Halococcus hamelinensis RepID=M0M177_9EURY
Beta-rfap synthase {ECO:0000313|EMBL:EMA39547.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
beta-RFAP synthase
qs_3_scaffold_125_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9458..10597)
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Haladaptatus paucihalophilus RepID=UPI000378E968
Uncharacterized protein {ECO:0000313|EMBL:EFW93436.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_3_scaffold_125_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10830..12605
DNA (1776bp) protein (592aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=797209 species="Archaea; Euryarchaeota;
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QX21_9EURY
qs_3_scaffold_125_17
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12697..13095)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XYM4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY65703.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
qs_3_scaffold_125_18
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13149..13826)
DNA (678bp) protein (226aa)
DNA binding domain-containing protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWW2_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EFW90765.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
DNA binding domain-containing protein
qs_3_scaffold_125_19
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13951..14700
DNA (750bp) protein (250aa)
hypothetical protein id=24646583 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10755.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_3_scaffold_125_trna_1
unknown

Not on your lists

comp(14909..14981)
DNA (73bp)
transferRNA
qs_3_scaffold_125_20
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15500..16102
DNA (603bp) protein (201aa)
Mechanosensitive ion channel protein MscS n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1I9_9EURY
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:EMA51736.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
mscS; mechanosensitive ion channel
qs_3_scaffold_125_21
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16195..17292)
DNA (1098bp) protein (366aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AXN5_9EURY
H/ACA RNA-protein complex component Cbf5p
qs_3_scaffold_125_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17296..17871)
DNA (576bp) protein (192aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9L0_9EURY
qs_3_scaffold_125_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17979..18965)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23468.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
HTR-like protein
qs_3_scaffold_125_24
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19135..19785)
DNA (651bp) protein (217aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MKX1_HALMO
qs_3_scaffold_125_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19999..20760
DNA (762bp) protein (254aa)
Transcription regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYS9_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ27572.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
AsnC family transcriptional regulator
qs_3_scaffold_125_26
unknown

Not on your lists

20987..21214
DNA (228bp) protein (76aa)

This feature has no annotations

qs_3_scaffold_125_27
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21736..23505
DNA (1770bp) protein (590aa)
Cationic amino acid transporter n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GAP3_9EURY
Cationic amino acid transporter {ECO:0000313|EMBL:ELZ68587.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM
cationic amino acid transporter
qs_3_scaffold_125_28
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23551..24126
DNA (576bp) protein (192aa)
Cationic amino acid transporter n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GAP3_9EURY
Cationic amino acid transporter {ECO:0000313|EMBL:ELZ68587.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM
cationic amino acid transporter
qs_3_scaffold_125_29
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24658..25356
DNA (699bp) protein (233aa)
Trk potassium uptake system protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JWV8_9EURY
Trk potassium uptake system protein {ECO:0000313|EMBL:EMA13657.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinai
trkA1; Trk potassium uptake system protein
Displaying items 1-30 of 39 in total

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