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qs_3_scaffold_19

Search features with annotation key words

Displaying items 1-30 of 67 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_19_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..174)
DNA (174bp) protein (58aa)
Chromosome segregation protein (Spc25, Csm1, Pcs1) n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYR7_9EURY
Chromosome segregation protein (Spc25, Csm1, Pcs1) {ECO:0000313|EMBL:ELZ27009.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="
qs_3_scaffold_19_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

545..715
DNA (171bp) protein (57aa)
ISH14-type transposase ISNamo7 {ECO:0000313|EMBL:CCQ35868.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
qs_3_scaffold_19_3
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(876..1469)
DNA (594bp) protein (198aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=B0R9L5_HALS3
Uncharacterized protein {ECO:0000313|EMBL:KDS92185.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
qs_3_scaffold_19_4
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1925..2347)
DNA (423bp) protein (141aa)
Transposase n=1 Tax=Natronococcus occultus SP4 RepID=L0K3E7_9EURY
Transposase {ECO:0000313|EMBL:KDE57929.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
transposase
qs_3_scaffold_19_5
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2665..2985
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BHE3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ09887.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
qs_3_scaffold_19_6
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2965..3105)
DNA (141bp) protein (47aa)
Transposase n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DU17_9EURY
Transposase {ECO:0000313|EMBL:EMA16159.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 13557.;"
transposase
qs_3_scaffold_19_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3197..3781
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CBE3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ19953.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_3_scaffold_19_8
unknown

Not on your lists

comp(4138..4227)
DNA (90bp) protein (30aa)

This feature has no annotations

qs_3_scaffold_19_9
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4416..5138)
DNA (723bp) protein (241aa)
Cell division control protein 6 n=1 Tax=Halorubrum sp. AJ67 RepID=V6DSH3_9EURY
Cell division control protein 6 {ECO:0000313|EMBL:CDK39127.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
cdc6l; cell division control protein 6
qs_3_scaffold_19_10
unknown

Not on your lists

comp(5487..5747)
DNA (261bp) protein (87aa)

This feature has no annotations

qs_3_scaffold_19_11
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5939..6226)
DNA (288bp) protein (96aa)
Transposase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YEV0_9EURY
Transposase {ECO:0000313|EMBL:ELY72067.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
IS240-type transposase (ISH102)
qs_3_scaffold_19_12
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6259..8196)
DNA (1938bp) protein (646aa)
Kinetochore-Ndc80 complex, subunit Spc25 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1H8_HALTV
Kinetochore-Ndc80 complex, subunit Spc25
Kinetochore-Ndc80 complex, subunit Spc25 {ECO:0000313|EMBL:ADB63225.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
qs_3_scaffold_19_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8273..8902)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INT1_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50221.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_3_scaffold_19_14
unknown

Not on your lists

9060..9236
DNA (177bp) protein (59aa)

This feature has no annotations

qs_3_scaffold_19_15
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9294..10100
DNA (807bp) protein (269aa)
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=halophilic archaeon J07HX5 RepID=U1MGM5_9EURY
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:ERG88354.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
Enoyl-CoA hydratase/isomerase
qs_3_scaffold_19_16
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10199..10522
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002D5E176
Type 11 methyltransferase {ECO:0000313|EMBL:ELY57003.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermon
type 11 methyltransferase
qs_3_scaffold_19_17
unknown

Not on your lists

comp(10844..11074)
DNA (231bp) protein (77aa)

This feature has no annotations

qs_3_scaffold_19_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11153..13216
DNA (2064bp) protein (688aa)
hyuA_2; N-methylhydantoinase (ATP-hydrolyzing) A 2 (EC:3.5.2.14) rbh
N-methylhydantoinase A 2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5W6_9EURY
N-methylhydantoinase A 2 {ECO:0000313|EMBL:EMA53327.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qs_3_scaffold_19_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13213..15075
DNA (1863bp) protein (621aa)
hyuB_2; N-methylhydantoinase (ATP-hydrolyzing) B 2 (EC:3.5.2.14)
N-methylhydantoinase B 2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6Z4_9EURY
N-methylhydantoinase B 2 {ECO:0000313|EMBL:EMA53328.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qs_3_scaffold_19_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15289..16506
DNA (1218bp) protein (406aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMZ3_9EURY
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EMA47047.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
L-carnitine dehydratase/bile acid-inducible protein F
qs_3_scaffold_19_21
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16507..17598
DNA (1092bp) protein (364aa)
(R)-citramalate synthase (EC:2.3.1.182)
Isopropylmalate/homocitrate/citramalate synthase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PIJ5_9EURY
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:ERH10266.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qs_3_scaffold_19_22
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17776..18426
DNA (651bp) protein (217aa)
DNA binding protein id=24646091 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative DNA binding protein {ECO:0000313|EMBL:ERH10267.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
DNA binding protein
qs_3_scaffold_19_23
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18582..19244
DNA (663bp) protein (221aa)
N-carbamoylsarcosine amidase-like protein n=1 Tax=Halogranum salarium B-1 RepID=J3JE26_9EURY
N-carbamoylsarcosine amidase-like protein {ECO:0000313|EMBL:EJN57994.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;
hypothetical protein
qs_3_scaffold_19_24
unknown

Not on your lists

19241..20014
DNA (774bp) protein (258aa)

This feature has no annotations

qs_3_scaffold_19_25
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20108..20716)
DNA (609bp) protein (203aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase, small subunit (Fragment) n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1NLQ5_9EURY
3-isopropylmalate dehydratase, small subunit {ECO:0000313|EMBL:ERG97943.1}; Flags: Fragment;; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.
qs_3_scaffold_19_26
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20716..22128)
DNA (1413bp) protein (471aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate is
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DYV1_9EURY
qs_3_scaffold_19_27
unknown

Not on your lists

22329..22694
DNA (366bp) protein (122aa)

This feature has no annotations

qs_3_scaffold_19_28
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23184..24395)
DNA (1212bp) protein (404aa)
Major facilitator superfamily MFS_1 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HJD2_9EURY
multidrug resistance protein mdtG Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
major facilitator superfamily protein
qs_3_scaffold_19_29
Corynebacterium imitans, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24515..26434)
DNA (1920bp) protein (640aa)
TRAP transporter, 4TM/12TM fusion protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMU5_9FIRM
C4-dicarboxylate ABC transporter permease
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:AIJ34444.1}; TaxID=156978 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacteri
qs_3_scaffold_19_30
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26462..27181)
DNA (720bp) protein (240aa)
TRAP transporter solute receptor TAXI family protein n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6CFR2_PSEST
TRAP transporter solute receptor TAXI family protein {ECO:0000313|EMBL:KJH81954.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;"
TRAP-T family transporter
Displaying items 1-30 of 67 in total

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