ggKbase home page

qs_3_scaffold_35

Search features with annotation key words

Displaying items 1-30 of 91 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_35_1
Pseudendoclonium akinetum, Pseudendoclonium, Ulvales, Ulvophyceae, Chlorophyta, Viridiplantae

Not on your lists

1037..1561
DNA (525bp) protein (175aa)
Putative site-specific DNA endonuclease n=1 Tax=Pseudendoclonium akinetum RepID=Q3ZIY9_PSEAK
Putative site-specific DNA endonuclease {ECO:0000313|EMBL:AAV80700.1}; TaxID=160070 species="Eukaryota; Viridiplantae; Chlorophyta; Ulvophyceae; Ulvales; Pseudendoclonium.;" source="Pseudendoclonium a
site-specific DNA endonuclease
qs_3_scaffold_35_trna_1
unknown

Not on your lists

2155..2239
DNA (85bp)
transferRNA
qs_3_scaffold_35_2
Pyramimonas parkeae, Pyramimonas, Pyramimonadales, Chlorophyta, Viridiplantae

Not on your lists


2340..3095
DNA (756bp) protein (252aa)
30S ribosomal protein S2, chloroplastic n=1 Tax=Pyramimonas parkeae RepID=C0JX53_9CHLO
30S ribosomal protein S2, chloroplastic {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=36894 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Pyramimonadales; Pyramimonas.;" source="Pyramimona
rpsB; 30S ribosomal protein S2
qs_3_scaffold_35_3
Nephroselmis astigmatica, Nephroselmis, Nephroselmidophyceae, Chlorophyta, Viridiplantae

Not on your lists

3325..3438
DNA (114bp) protein (38aa)
50S ribosomal protein L36, chloroplastic n=3 Tax=Pyropia RepID=RK36_PYRYE
50S ribosomal protein L36, chloroplastic {ECO:0000256|HAMAP-Rule:MF_00251}; TaxID=259378 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Nephroselmidophyceae; Nephroselmis.;" source="Ne
rpmJ; 50S ribosomal protein L36
qs_3_scaffold_35_4
unknown

Not on your lists

3440..5122
DNA (1683bp) protein (561aa)

This feature has no annotations

qs_3_scaffold_35_5
Pyramimonas parkeae, Pyramimonas, Pyramimonadales, Chlorophyta, Viridiplantae

Not on your lists


5332..5706
DNA (375bp) protein (125aa)
30S ribosomal protein S12, chloroplastic n=1 Tax=Pyramimonas parkeae RepID=C0JX38_9CHLO
30S ribosomal protein S12, chloroplastic {ECO:0000256|HAMAP-Rule:MF_00403}; TaxID=36894 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Pyramimonadales; Pyramimonas.;" source="Pyramimon
30S ribosomal protein S12
qs_3_scaffold_35_6
Eutreptiella gymnastica, Eutreptiella, Eutreptiales, Euglenida, Eukaryota

Not on your lists


5706..6191
DNA (486bp) protein (162aa)
30S ribosomal protein S7 n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034BC08A
Ribosomal protein S7 {ECO:0000256|RuleBase:RU003620}; TaxID=73025 species="Eukaryota; Euglenozoa; Euglenida; Eutreptiales; Eutreptiella.;" source="Eutreptiella gymnastica.;"
30S ribosomal protein S7
qs_3_scaffold_35_7
unknown

Not on your lists

6398..6496
DNA (99bp) protein (33aa)

This feature has no annotations

qs_3_scaffold_35_trna_2
unknown

Not on your lists

6522..6595
DNA (74bp)
transferRNA
qs_3_scaffold_35_trna_3
unknown

Not on your lists

6630..6702
DNA (73bp)
transferRNA
qs_3_scaffold_35_8
Calliarthron tuberculosum, Calliarthron, Corallinales, Corallinophycidae, Eukaryota

Not on your lists

6742..7638
DNA (897bp) protein (299aa)
Cytochrome c biogenesis protein CcsA n=1 Tax=Calliarthron tuberculosum RepID=M4IU90_CALTB
Cytochrome c biogenesis protein CcsA {ECO:0000256|HAMAP-Rule:MF_01391}; TaxID=48942 species="Eukaryota; Rhodophyta; Florideophyceae; Corallinophycidae; Corallinales; Corallinaceae; Corallinoideae; Cal
ccsA; c-type cytochrome synthesis protein CcsA
qs_3_scaffold_35_9
Pyramimonas parkeae, Pyramimonas, Pyramimonadales, Chlorophyta, Viridiplantae

Not on your lists

7707..8297
DNA (591bp) protein (197aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-R
protease subunit of ATP-dependent protease (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Pyramimonas parkeae RepID=C0JWZ4_9CHLO
qs_3_scaffold_35_10
Pyramimonas parkeae, Pyramimonas, Pyramimonadales, Chlorophyta, Viridiplantae

Not on your lists

8447..9973
DNA (1527bp) protein (509aa)
Photosystem II CP47 chlorophyll apoprotein n=1 Tax=Pyramimonas parkeae RepID=C0JWZ3_9CHLO
Photosystem II CP47 reaction center protein {ECO:0000256|HAMAP-Rule:MF_01495, ECO:0000256|RuleBase:RU004535}; PSII 47 kDa protein {ECO:0000256|HAMAP-Rule:MF_01495}; Protein CP-47 {ECO:0000256|HAMAP-Ru
photosystem II chlorophyll-binding protein CP47
qs_3_scaffold_35_11
Volvox carteri, Volvox, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

9989..10084
DNA (96bp) protein (32aa)
Photosystem II reaction center protein T {ECO:0000256|HAMAP-Rule:MF_00808}; Short=PSII-T {ECO:0000256|HAMAP-Rule:MF_00808};; TaxID=3068 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; C
qs_3_scaffold_35_12
Stigeoclonium helveticum, Stigeoclonium, Chaetophorales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

10107..10241
DNA (135bp) protein (45aa)
Protein PsbN n=1 Tax=Stigeoclonium helveticum RepID=PSBN_STIHE
Protein PsbN {ECO:0000255|HAMAP-Rule:MF_00293}; TaxID=55999 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chaetophorales; Chaetophorales incertae sedis; Stigeoclonium.;" source="Stige
psbN; photosystem II protein N; K02715 PsbN protein
qs_3_scaffold_35_13
Pedinomonas minor, Pedinomonas, Pedinomonadales, Pedinophyceae, Chlorophyta, Viridiplantae

Not on your lists

10254..10484
DNA (231bp) protein (77aa)
Photosystem II reaction center protein H n=1 Tax=Pedinomonas minor RepID=C7BEL3_PEDMN
Photosystem II reaction center protein H {ECO:0000256|HAMAP-Rule:MF_00752}; Short=PSII-H {ECO:0000256|HAMAP-Rule:MF_00752};; TaxID=3159 species="Eukaryota; Viridiplantae; Chlorophyta; Pedinophyceae; P
psbH; photosystem II reaction center protein H
qs_3_scaffold_35_trna_4
unknown

Not on your lists

10614..10700
DNA (87bp)
transferRNA
qs_3_scaffold_35_trna_5
unknown

Not on your lists

10783..10856
DNA (74bp)
transferRNA
qs_3_scaffold_35_trna_6
unknown

Not on your lists

10889..10960
DNA (72bp)
transferRNA
qs_3_scaffold_35_14
Ettlia pseudoalveolaris, Ettlia, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

11117..12055
DNA (939bp) protein (313aa)
Apocytochrome f n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1KR40_MICSR
Cytochrome f {ECO:0000256|HAMAP-Rule:MF_00610}; Flags: Precursor;; TaxID=3102 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadales incertae sedis; Ettlia
apocytochrome f
qs_3_scaffold_35_15
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists


12140..12331
DNA (192bp) protein (64aa)
30S ribosomal protein S18 n=2 Tax=Lyngbya RepID=A0YR62_LYNSP
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
SSU ribosomal protein S18P
qs_3_scaffold_35_16
Porphyra umbilicalis, Porphyra, Bangiales, Bangiophyceae, Eukaryota

Not on your lists

12517..15390
DNA (2874bp) protein (958aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
RNA polymerase beta'' subunit n=1 Tax=Porphyra umbilicalis RepID=J7F9J3_PORUM
RNA polymerase beta'' subunit {ECO:0000313|EMBL:AFC39919.1}; TaxID=2786 species="Eukaryota; Rhodophyta; Bangiophyceae; Bangiales; Bangiaceae; Porphyra.;" source="Porphyra umbilicalis (Purple laver) (R
qs_3_scaffold_35_trna_7
unknown

Not on your lists

15648..15731
DNA (84bp)
transferRNA
qs_3_scaffold_35_17
Monomastix sp. OKE-1, Monomastix, Monomastigales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

15804..16046
DNA (243bp) protein (81aa)
Cytochrome b559 subunit alpha n=1 Tax=Monomastix sp. (strain OKE-1) RepID=C0JWM0_MONSK
Cytochrome b559 subunit alpha {ECO:0000256|HAMAP-Rule:MF_00642, ECO:0000256|RuleBase:RU004529}; PSII reaction center subunit V {ECO:0000256|HAMAP-Rule:MF_00642, ECO:0000256|RuleBase:RU004529}; TaxID=1
cytochrome b559, subunit alpha
qs_3_scaffold_35_18
Xylochloris irregularis, Xylochloris, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

16121..16246
DNA (126bp) protein (42aa)
Cytochrome b559 subunit beta n=1 Tax=Monomastix sp. (strain OKE-1) RepID=C0JWM1_MONSK
Cytochrome b559 subunit beta {ECO:0000256|HAMAP-Rule:MF_00643, ECO:0000256|RuleBase:RU004529}; PSII reaction center subunit VI {ECO:0000256|HAMAP-Rule:MF_00643, ECO:0000256|RuleBase:RU004529}; TaxID=4
cytochrome b559, subunit beta
qs_3_scaffold_35_19
Roya anglica, Roya, Zygnematales, Zygnemophyceae, Streptophyta, Viridiplantae

Not on your lists

16439..16561
DNA (123bp) protein (41aa)
Photosystem II reaction center protein J n=1 Tax=Cicer arietinum RepID=B5LMN8_CICAR
Photosystem II reaction center protein J {ECO:0000256|HAMAP-Rule:MF_01305}; Short=PSII-J {ECO:0000256|HAMAP-Rule:MF_01305};; TaxID=43943 species="Eukaryota; Viridiplantae; Streptophyta; Zygnemophyceae
PsbJ
qs_3_scaffold_35_20
Pabia signiensis, Pabia, Prasiolales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

16882..16998
DNA (117bp) protein (39aa)
Cytochrome b6-f complex subunit 5 n=2 Tax=Chara vulgaris RepID=PETG_CHAVU
Cytochrome b6-f complex subunit 5 {ECO:0000256|HAMAP-Rule:MF_00432}; Cytochrome b6-f complex subunit PetG {ECO:0000256|HAMAP-Rule:MF_00432}; Cytochrome b6-f complex subunit V {ECO:0000256|HAMAP-Rule:M
Cytochrome B6-F complex subunit 5
qs_3_scaffold_35_trna_8
unknown

Not on your lists

17198..17268
DNA (71bp)
transferRNA
qs_3_scaffold_35_trna_26
unknown

Not on your lists

comp(17469..17540)
DNA (72bp)
transferRNA
qs_3_scaffold_35_21
Oocystis solitaria, Oocystis, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(17677..19104)
DNA (1428bp) protein (476aa)
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338};; TaxID=1
ribulose 1,5-bisphosphate carboxylase large subunit (EC:4.1.1.39)
Ribulose bisphosphate carboxylase large chain n=2 Tax=Oocystis RepID=C7BEH6_OOCSO
Displaying items 1-30 of 91 in total

View Taxonomy