ggKbase home page

qs_3_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 48 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_39_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1..351
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B316D6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23212.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_39_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

424..564
DNA (141bp) protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:ABC43986.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_39_3
unknown

Not on your lists

comp(571..837)
DNA (267bp) protein (89aa)

This feature has no annotations

qs_3_scaffold_39_4
unknown

Not on your lists

comp(846..1136)
DNA (291bp) protein (97aa)

This feature has no annotations

qs_3_scaffold_39_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1597..1818
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HBP0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25445.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_39_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2088..3155)
DNA (1068bp) protein (356aa)
hypothetical protein id=24658860 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24057.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_39_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3212..4831)
DNA (1620bp) protein (540aa)
hypothetical protein id=24658859 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24056.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_39_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4849..5355)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7Q0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24055.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_39_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5423..6691)
DNA (1269bp) protein (423aa)
peptidase, M50 family protein; K01417 [EC:3.4.24.-] id=24658857 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptidase, M50 family protein {ECO:0000313|EMBL:ABC44881.1}; EC=3.4.24.- {ECO:0000313|EMBL:ABC44881.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
peptidase, M50 family protein
qs_3_scaffold_39_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6769..7983)
DNA (1215bp) protein (405aa)
Aspartate aminotransferase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S410_SALRD
aspartate aminotransferase
Aspartate aminotransferase {ECO:0000313|EMBL:ABC45510.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qs_3_scaffold_39_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8142..9509)
DNA (1368bp) protein (456aa)
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:ABC44954.1}; EC=6.4.1.2 {ECO:0000313|EMBL:ABC44954.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S411_SALRD
accC; acetyl-CoA carboxylase, biotin carboxylase
qs_3_scaffold_39_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9788..10438)
DNA (651bp) protein (217aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7P5_SALRM
accB; Acetyl-CoA carboxylase, biotin carboxyl carrier protein
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:CBH24050.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
qs_3_scaffold_39_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10515..11093)
DNA (579bp) protein (193aa)
efp; elongation factor P
efp; elongation factor P; K02356 elongation factor P id=24658853 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141, ECO:0000313|EMBL:CBH24049.1}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II
qs_3_scaffold_39_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11405..12556)
DNA (1152bp) protein (384aa)
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.5)
Citrate synthase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE56_RHOMR
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus S
qs_3_scaffold_39_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12522..13451)
DNA (930bp) protein (310aa)
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
Methylisocitrate lyase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MCQ0_RHOM4
methylisocitrate lyase
qs_3_scaffold_39_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13581..15092)
DNA (1512bp) protein (504aa)
2-methylcitrate dehydratase (EC:4.2.1.79)
2-methylcitrate dehydratase {ECO:0000313|EMBL:AEN71995.1}; EC=4.2.1.79 {ECO:0000313|EMBL:AEN71995.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
2-methylcitrate dehydratase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE03_RHOMR
qs_3_scaffold_39_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15241..15999)
DNA (759bp) protein (253aa)
GlcNAc-PI de-N-acetylase family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S414_SALRD
GlcNAc-PI de-N-acetylase family
GlcNAc-PI de-N-acetylase family {ECO:0000313|EMBL:ABC44079.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
qs_3_scaffold_39_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(16219..18849)
DNA (2631bp) protein (877aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:CBH24047.1};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=7616
Leucine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7P2_SALRM
leuS; leucyl-tRNA synthetase
qs_3_scaffold_39_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19325..19756
DNA (432bp) protein (144aa)
CoA-binding domain-containing protein
CoA-binding domain-containing protein id=24658850 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
CoA binding domain protein {ECO:0000313|EMBL:ABC45403.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qs_3_scaffold_39_20
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19878..20843)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Paenibacillus massiliensis RepID=UPI0003727F53
Uncharacterized protein {ECO:0000313|EMBL:KIL41323.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
hypothetical protein
qs_3_scaffold_39_21
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(20903..21547)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003809689
sulfatase Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
arylsulfatase
qs_3_scaffold_39_22
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22332..23753)
DNA (1422bp) protein (474aa)
Amino acid permease n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MF43_CORCM
steT; amino acid permease
Amino acid permease {ECO:0000313|EMBL:AFE10425.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallo
qs_3_scaffold_39_23
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(24285..24551)
DNA (267bp) protein (89aa)
mdsA4; mucin-desulfating sulfatase (EC:3.1.6.-)
Sulfatase, putative n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JJG3_9BACT
Sulfatase, putative {ECO:0000313|EMBL:EDY83265.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
qs_3_scaffold_39_24
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

comp(24544..25056)
DNA (513bp) protein (171aa)
mdsA4; mucin-desulfating sulfatase (EC:3.1.6.-) Tax=RBG_13_Chloroflexi_53_26_curated
N-acetylglucosamine-6-sulfatase (EC:3.1.6.14)
exported sulfatase id=4839551 bin=GWA2_Ignavibacteria_55_11 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
qs_3_scaffold_39_25
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(25108..26178)
DNA (1071bp) protein (357aa)
ApbE family lipoprotein n=1 Tax=Schlesneria paludicola RepID=UPI00029AF280
membrane-associated lipoprotein Tax=GWF2_Verrucomicrobia_62_7_curated
membrane-associated lipoprotein
qs_3_scaffold_39_26
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(26189..27034)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R2I7_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV62487.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Iso
qs_3_scaffold_39_27
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(27101..28588)
DNA (1488bp) protein (496aa)
Sulfatase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGT6_9BACT
Sulfatase {ECO:0000313|EMBL:EEF60857.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source=
sulfatase
qs_3_scaffold_39_28
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(28604..29944)
DNA (1341bp) protein (447aa)
Putative dehydrogenase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DED0_SINAD
dehydrogenase
Putative dehydrogenase {ECO:0000313|EMBL:AGA27011.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acid
qs_3_scaffold_39_29
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30222..31628)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5PJX3_9PORP
Contig85, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75747.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="
hypothetical protein
qs_3_scaffold_39_30
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31755..32627)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HV46_9SPHI
Sulfatase-modifying factor {ECO:0000313|EMBL:KEQ31406.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter an
hypothetical protein
Displaying items 1-30 of 48 in total

View Taxonomy