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qs_3_scaffold_45

Search features with annotation key words

Displaying items 1-30 of 89 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_45_1
unknown

Not on your lists

453..860
DNA (408bp) protein (136aa)

This feature has no annotations

qs_3_scaffold_45_2
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(951..1580)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI00038051D9
transcriptional regulator Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
transcriptional regulator
qs_3_scaffold_45_3
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1684..2043
DNA (360bp) protein (120aa)
tRNA-binding protein n=1 Tax=Aeromonas hydrophila RepID=UPI00002FC88B
tRNA-binding protein
Export-related chaperone CsaA {ECO:0000313|EMBL:ADY59704.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera
qs_3_scaffold_45_4
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

2131..3087
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKC1_MARHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB12370.1}; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (st
qs_3_scaffold_45_5
Pseudanabaena biceps, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3183..4055)
DNA (873bp) protein (291aa)
Helix-turn-helix domain protein n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8N259_9CYAN
Helix-turn-helix domain protein {ECO:0000313|EMBL:ELS32348.1}; TaxID=927668 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena biceps PCC
qs_3_scaffold_45_6
unknown

Not on your lists

4527..4685
DNA (159bp) protein (53aa)

This feature has no annotations

qs_3_scaffold_45_7
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4717..5613)
DNA (897bp) protein (299aa)
Glr2279 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NIA4_GLOVI
NmrA family protein {ECO:0000313|EMBL:KJH69940.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
hypothetical protein
qs_3_scaffold_45_8
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5752..6591)
DNA (840bp) protein (280aa)
Transcriptional regulator, AraC family n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XIS0_9CHRO
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AFZ32510.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 742
qs_3_scaffold_45_9
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6835..7767)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPC0_METAC
Uncharacterized protein {ECO:0000313|EMBL:AKB25185.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
hypothetical protein
qs_3_scaffold_45_10
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7802..8527)
DNA (726bp) protein (242aa)
Phospholipase/carboxylesterase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X5I9_9EURY
Phospholipase/carboxylesterase {ECO:0000313|EMBL:ELY55858.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius inn
phospholipase
qs_3_scaffold_45_11
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8524..9489)
DNA (966bp) protein (322aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LQ97_DINSH
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AJK53495.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
qs_3_scaffold_45_12
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(9623..11323)
DNA (1701bp) protein (567aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI000312C0DF
Thioredoxin reductase {ECO:0000313|EMBL:KIE06527.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
qs_3_scaffold_45_13
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11549..12466
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002D3125E
Predicted protein {ECO:0000313|EMBL:EFL06282.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
hypothetical protein
qs_3_scaffold_45_14
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12466..13167
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00036FC0F8
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ACL46921.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;
qs_3_scaffold_45_15
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

13241..14113
DNA (873bp) protein (291aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZGU6_ANACC
NADP oxidoreductase coenzyme F420-dependent
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:AFZ58458.1}; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena cylindrica (strain ATCC
qs_3_scaffold_45_16
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

14161..15201
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI000314C269
Alpha/beta hydrolase {ECO:0000313|EMBL:KIY12721.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
alpha/beta hydrolase fold protein
qs_3_scaffold_45_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15313..16332
DNA (1020bp) protein (340aa)
6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase (Decarboxylating) n=2 Tax=Stenotrophomonas maltophilia RepID=J7V9C1_STEMA
6-phosphogluconate dehydrogenase (Decarboxylating) {ECO:0000313|EMBL:EJP79161.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomo
qs_3_scaffold_45_18
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

16516..17436
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9VYY7_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ESA37899.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Island J.;
AraC family transcriptional regulator
qs_3_scaffold_45_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(17448..17915)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00038081A3
RES domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
qs_3_scaffold_45_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(17964..18455)
DNA (492bp) protein (164aa)
Toxin-antitoxin system antitoxin component family n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A243_9PROT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
qs_3_scaffold_45_21
unknown

Not on your lists

18800..19150
DNA (351bp) protein (117aa)

This feature has no annotations

qs_3_scaffold_45_22
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19210..21153
DNA (1944bp) protein (648aa)
glycosyl hydrolase family 15 n=1 Tax=Salisaeta longa RepID=UPI0003B37049
Glycoside hydrolase {ECO:0000313|EMBL:GAB62373.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
glycoside hydrolase
qs_3_scaffold_45_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21391..22416)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S168_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44522.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_45_24
unknown

Not on your lists

22467..23198
DNA (732bp) protein (244aa)

This feature has no annotations

qs_3_scaffold_45_25
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23063..23938)
DNA (876bp) protein (292aa)
Cell division protein FtsX n=2 Tax=Rhodothermus marinus RepID=D0MFK6_RHOM4
hypothetical protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s
qs_3_scaffold_45_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(24091..25932)
DNA (1842bp) protein (614aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123, ECO:0000313|EMBL:CBH24101.1};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=7
Arginine--tRNA ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7U6_SALRM
argS; arginyl-tRNA synthetase
qs_3_scaffold_45_27
unknown

Not on your lists

26151..26627
DNA (477bp) protein (159aa)

This feature has no annotations

qs_3_scaffold_45_28
Salisaeta longa, Salisaeta, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26663..27166)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B43724
qs_3_scaffold_45_29
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(27193..27390)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QP38_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB37644.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3390
qs_3_scaffold_45_30
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27940..28986)
DNA (1047bp) protein (349aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
quinolinate synthetase n=1 Tax=Salisaeta longa RepID=UPI0003B406CF
quinolinate synthetase complex subunit A
Displaying items 1-30 of 89 in total

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