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qs_3_scaffold_750

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_750_1
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..300
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Halarchaeum acidiphilum RepID=UPI0003684651
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:GAD53824.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum M
beta-lactamase domain protein
qs_3_scaffold_750_2

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comp(321..1439)
DNA (1119bp) protein (373aa)
Acyl-CoA dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y8Q7_9ARCH
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ESS07452.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
acyl-CoA dehydrogenase domain-containing protein
qs_3_scaffold_750_3
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1506..2288)
DNA (783bp) protein (261aa)
HpcH/HpaI aldolase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWW9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG02124.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
qs_3_scaffold_750_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2336..3307)
DNA (972bp) protein (324aa)
serA2; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] id=24616157 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ESP87982.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candida
D-3-phosphoglycerate dehydrogenase
qs_3_scaffold_750_5
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3411..3659
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA62891.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
qs_3_scaffold_750_6

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3670..4779
DNA (1110bp) protein (370aa)
Putative metal-dependent hydrolase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y1Q6_9ARCH
Putative metal-dependent hydrolase {ECO:0000313|EMBL:ESS06551.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
amidohydrolase 2
qs_3_scaffold_750_7
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4782..5156
DNA (375bp) protein (125aa)
Rieske (2Fe-2S) domain-containing protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SWT2_NATMM
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:ELY30110.1}; Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:ADD05814.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobac
qs_3_scaffold_750_8
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5175..5882
DNA (708bp) protein (236aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XBM7_9EURY
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:KDE57645.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola
pcmE; putative oxalocitramalate aldolase
qs_3_scaffold_750_9
unknown

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comp(5885..6031)
DNA (147bp) protein (49aa)

This feature has no annotations

qs_3_scaffold_750_10
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5989..6735)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WC35_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY46999.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
hypothetical protein
qs_3_scaffold_750_11
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6878..7258)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NJW4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA58277.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
qs_3_scaffold_750_12

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7364..8926
DNA (1563bp) protein (521aa)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y469_9ARCH
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:ESS07451.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
fadD6; Long-chain-fatty-acid--CoA ligase
qs_3_scaffold_750_13
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9132..10598
DNA (1467bp) protein (489aa)
livJ; ABC-type branched-chain amino acid transport systems, substrate-binding protein id=24633844 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ERG96638.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
branched-chain amino acid ABC transporter substrate-binding protein
qs_3_scaffold_750_14
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10608..11483
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI000360DF1E
branched-chain amino acid transport permease; K01997 branched-chain amino acid transport system permease protein Tax=RBG_16_Deltaproteobacteria_49_23_curated
branched-chain amino acid ABC transporter permease
qs_3_scaffold_750_15
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11483..12469
DNA (987bp) protein (329aa)
Putative ABC transport system, membrane protein n=1 Tax=Pseudomonas fluorescens (strain SBW25) RepID=C3JYX9_PSEFS
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:KEA64401.1}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae;
putative ABC transporter membrane protein
qs_3_scaffold_750_16
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12603..12794
DNA (192bp) protein (64aa)
Transposase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KFY7_9EURY
tnp; transposase
Transposase {ECO:0000313|EMBL:EMA08843.1}; Flags: Fragment;; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismorti
Displaying 16 items

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