ggKbase home page

qs_3_scaffold_81

Search features with annotation key words

Displaying items 1-30 of 33 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_81_1
unknown

Not on your lists

comp(1..93)
DNA (93bp) protein (31aa)

This feature has no annotations

qs_3_scaffold_81_2
unknown

Not on your lists

comp(267..743)
DNA (477bp) protein (159aa)

This feature has no annotations

qs_3_scaffold_81_3
unknown

Not on your lists

comp(797..1324)
DNA (528bp) protein (176aa)

This feature has no annotations

qs_3_scaffold_81_4
unknown

Not on your lists

comp(1435..2097)
DNA (663bp) protein (221aa)

This feature has no annotations

qs_3_scaffold_81_5
unknown

Not on your lists

comp(2321..2881)
DNA (561bp) protein (187aa)

This feature has no annotations

qs_3_scaffold_81_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3151..5019)
DNA (1869bp) protein (623aa)
recQ; ATP-dependent DNA helicase RecQ; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] id=24657143 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ABC45452.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABC45452.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
recQ; ATP-dependent DNA helicase RecQ
qs_3_scaffold_81_7
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(5259..6380)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXK9_TRURR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI14611.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain D
qs_3_scaffold_81_8
unknown

Not on your lists

comp(6576..7910)
DNA (1335bp) protein (445aa)

This feature has no annotations

qs_3_scaffold_81_9
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

8031..8540
DNA (510bp) protein (170aa)
hypothetical protein id=24657760 bin=Salinibacter_ruber species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX03667.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantia
qs_3_scaffold_81_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8525..9748
DNA (1224bp) protein (408aa)
Putative ATPase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H606_SALRM
ATPase
Putative ATPase {ECO:0000313|EMBL:CBH23461.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strai
qs_3_scaffold_81_11
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9789..11720)
DNA (1932bp) protein (644aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003740CD0
redoxin domain-containing protein Tax=GWA2_Ignavibacteria_54_16_curated
redoxin domain-containing protein
qs_3_scaffold_81_12
unknown

Not on your lists

12109..12522
DNA (414bp) protein (138aa)

This feature has no annotations

qs_3_scaffold_81_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12824..13510
DNA (687bp) protein (229aa)
DSBA oxidoreductase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHX2_RHOMR
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:AEN73730.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus
qs_3_scaffold_81_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13553..15985)
DNA (2433bp) protein (811aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
DNA helicase II n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H687_SALRM
uvrD; DNA helicase II
qs_3_scaffold_81_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16151..17533
DNA (1383bp) protein (461aa)
Nucleoside permease n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H685_SALRM
NupC family protein
NupC family protein {ECO:0000313|EMBL:ABC45113.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qs_3_scaffold_81_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17741..18457)
DNA (717bp) protein (239aa)
TonB family protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME73_RHOM4
TonB family protein
TonB family protein {ECO:0000313|EMBL:ACY47297.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qs_3_scaffold_81_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18517..19221)
DNA (705bp) protein (235aa)
Methyltransferase type 11 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIK1_RHOMR
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEN72334.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
qs_3_scaffold_81_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19337..20143)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B758EA
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AEN72333.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodot
qs_3_scaffold_81_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20212..21042)
DNA (831bp) protein (277aa)
Phosphoglycolate phosphatase {ECO:0000313|EMBL:CBH23537.1}; EC=3.1.3.18 {ECO:0000313|EMBL:CBH23537.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodother
Phosphoglycolate phosphatase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S555_SALRD
phosphoglycolate phosphatase
qs_3_scaffold_81_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21070..21915)
DNA (846bp) protein (282aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094, ECO:0000313|EMBL:CBH23536.1};; TaxID=761659 species="Bacteria; Bacteroidetes;
fab1; enoyl-(acyl-carrier-protein) reductase; K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] id=24657382 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
fab1; enoyl-(acyl-carrier-protein) reductase
qs_3_scaffold_81_21
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22228..23757
DNA (1530bp) protein (510aa)
histidine kinase n=1 Tax=Acidovorax avenae RepID=UPI0003069B9B
Hpt sensor hybrid histidine kinase {ECO:0000313|EMBL:EKX85144.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo
multi-sensor hybrid histidine kinase
qs_3_scaffold_81_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23767..24618)
DNA (852bp) protein (284aa)
Inositol-1-monophosphatase {ECO:0000313|EMBL:ABC46307.1}; EC=3.1.3.25 {ECO:0000313|EMBL:ABC46307.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
Inositol-1-monophosphatase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S557_SALRD
inositol-1-monophosphatase
qs_3_scaffold_81_23
unknown

Not on your lists

24807..25790
DNA (984bp) protein (328aa)

This feature has no annotations

qs_3_scaffold_81_24
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25642..26394)
DNA (753bp) protein (251aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I6C4_RHOVT
hypothetical protein
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:ADP69485.1}; Flags: Precursor;; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae;
qs_3_scaffold_81_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26586..27353
DNA (768bp) protein (256aa)
Biotin--acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:ABC45061.1}; EC=6.3.4.15 {ECO:0000313|EMBL:ABC45061.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Biotin--acetyl-CoA-carboxylase ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S559_SALRD
biotin--acetyl-CoA-carboxylase ligase
qs_3_scaffold_81_26
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27449..28249
DNA (801bp) protein (267aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-R
Type III pantothenate kinase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIJ4_RHOMR
putative Baf family transcriptional acitvator
qs_3_scaffold_81_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28278..29144)
DNA (867bp) protein (289aa)
hypothetical protein
hypothetical protein; K09861 hypothetical protein id=24657376 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23530.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_81_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29274..29807)
DNA (534bp) protein (178aa)
hypothetical protein
hypothetical protein id=24657375 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23529.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_81_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29892..30707
DNA (816bp) protein (272aa)
Beta-D-galactosidase, putative n=2 Tax=Salinibacter ruber RepID=D5H673_SALRM
mhpC; beta-D-galactosidase
Beta-D-galactosidase, putative {ECO:0000313|EMBL:CBH23528.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qs_3_scaffold_81_30
unknown

Not on your lists

30739..31356
DNA (618bp) protein (206aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

View Taxonomy