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qs_3_scaffold_35_39

Organism: QS_3_UNK

megabin RP 29 / 55 MC: 19 BSCG 30 / 51 MC: 20 ASCG 31 / 38 MC: 25
Location: 42989..43798

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=PEP {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; Plastid-encoded RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 34.7
  • Coverage: 262.0
  • Bit_score: 140
  • Evalue 3.90e-30
DNA-directed RNA polymerase subunit alpha n=2 Tax=Ostreococcus tauri RepID=RPOA_OSTTA similarity UNIREF
DB: UNIREF100
  • Identity: 31.6
  • Coverage: 266.0
  • Bit_score: 125
  • Evalue 7.10e-26
rpoA; DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 30.5
  • Coverage: 262.0
  • Bit_score: 123
  • Evalue 1.30e-25

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Taxonomy

Interfilum terricola → Interfilum → Klebsormidiales → Klebsormidiophyceae → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 810
ATGCAGATTTACGAAAAAAGCTTTCGAAAGTTGTATGCAATAGAAGAAAAAAAAATAGACGATACAACTTTTTATGCGAAAGTAAAACTTTCGCCGTATCAGAGAGGTCAAGGCATTACAGTAGCCAACACTCTTCGTAGAATTCTGCTAAGTGAACTTGATTGTATTGGTATACACTCGGTACAGATTGAAGGTGTATCACATGAATTTACAGTAAAAGCAGGCATTCGCGAATCCATTCCTGAGATACTTTCGAATTTAAGCAGAATTGTTTTTCGATGTGTACCTACACAAAAGCAATCAACACACAAGCAATATCGCAACCAGGATTATGAAAAGCAATATGATATGCACATTGATAATTATAAAATATTAACGCAATGCAATAAAACTAATGCCGGAAGTTTATACGCTGAAGATATAAACTTACCTACGGATATCCAATGTGTTGCGCCAAAACAACCTATTGCTACCTTAGTATCAGCACATACTGATTTGCGATTAAACTTGCTTTTGTTGCGATCGAAAGGGTATACTCAAAACTCCCCTCATAATAATATGCAGCTTCTAGATATAAGAAGTGATTCATCGGCGCAAACTCAACATCAACATGCTCCATTTTTACCAATAGATACTTCATTTAACCCTGTAAAGAAGATAAACTATAGCATACATCAAGAATGGTATACTACTACTGCACAAGAATCTATCTTTTTAGAAATTTGGACTGATGGTTCTTCATATCCAGTTGAATCTTTAGCAAAGGCTTCATTAATTCTACGTCAACTATTTCAACCTTTTACATTTTAA
PROTEIN sequence
Length: 270
MQIYEKSFRKLYAIEEKKIDDTTFYAKVKLSPYQRGQGITVANTLRRILLSELDCIGIHSVQIEGVSHEFTVKAGIRESIPEILSNLSRIVFRCVPTQKQSTHKQYRNQDYEKQYDMHIDNYKILTQCNKTNAGSLYAEDINLPTDIQCVAPKQPIATLVSAHTDLRLNLLLLRSKGYTQNSPHNNMQLLDIRSDSSAQTQHQHAPFLPIDTSFNPVKKINYSIHQEWYTTTAQESIFLEIWTDGSSYPVESLAKASLILRQLFQPFTF*