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qs_3_scaffold_1358

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_1358_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..571)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJE6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45478.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_3_scaffold_1358_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(568..1233)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N0B1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50100.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_3_scaffold_1358_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1233..1751)
DNA (519bp) protein (173aa)
Transcription factor E n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM19_9EURY
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
transcription initiation factor IIE, alpha subunit
qs_3_scaffold_1358_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1815..2351)
DNA (537bp) protein (179aa)
tRNA (cytidine(56)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00077}; EC=2.1.1.206 {ECO:0000256|HAMAP-Rule:MF_00077};; tRNA ribose 2'-O-methyltransferase aTrm56 {ECO:0000256|HAMAP-Rule:MF_0007
tRNA (cytidine(56)-2'-O)-methyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MID6_9EURY
tRNA 2'-O-methylase
qs_3_scaffold_1358_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2355..3050)
DNA (696bp) protein (232aa)
DSBA oxidoreductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIG0_9EURY
DSBA oxidoreductase {ECO:0000313|EMBL:EMA45471.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
DSBA oxidoreductase
qs_3_scaffold_1358_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3154..4083
DNA (930bp) protein (310aa)
galE2; UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4B2_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA52721.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
qs_3_scaffold_1358_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4109..4441)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N456_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52722.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_3_scaffold_1358_8

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4576..5322
DNA (747bp) protein (249aa)
Putative methyltransferase n=1 Tax=uncultured bacterium RepID=B0L3I8_9BACT
Marine sediment metagenome DNA, contig: S01H1_C00395 {ECO:0000313|EMBL:GAF76670.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
methyltransferase
qs_3_scaffold_1358_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5862..6005
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJD5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45468.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_3_scaffold_1358_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7092..7595
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MID0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45467.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_3_scaffold_1358_11
unknown

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7936..8223
DNA (288bp) protein (96aa)

This feature has no annotations

qs_3_scaffold_1358_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8334..9476
DNA (1143bp) protein (381aa)
Acyl-CoA dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N461_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA52727.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
acyl-CoA dehydrogenase rbh
qs_3_scaffold_1358_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9563..9787
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N3P6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52163.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
Displaying 13 items

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