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qs_3_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 292 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_0_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..522)
DNA (522bp) protein (174aa)
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFQ8_RHOM4
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACY47585.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" s
qs_3_scaffold_0_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

897..2222
DNA (1326bp) protein (442aa)
ROK family protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF67_RHOM4
ROK family protein
ROK family protein {ECO:0000313|EMBL:AHG87898.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
qs_3_scaffold_0_3
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2321..3661)
DNA (1341bp) protein (447aa)
Putative uncharacterized protein n=1 Tax=Algoriphagus machipongonensis RepID=A3I156_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFF15228.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis
qs_3_scaffold_0_4
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3741..4760)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ELR6_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI49472.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 2953
qs_3_scaffold_0_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5558..7666)
DNA (2109bp) protein (703aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:
potassium transporter n=1 Tax=Salisaeta longa RepID=UPI0003B4CF23
V-type H(+)-translocating pyrophosphatase
qs_3_scaffold_0_6
unknown

Not on your lists

8046..8216
DNA (171bp) protein (57aa)

This feature has no annotations

qs_3_scaffold_0_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8576..9562)
DNA (987bp) protein (329aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HAT5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25140.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_0_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9670..11145)
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B407FD
Conserved hypothetical protein CHP03440
Uncharacterized protein {ECO:0000313|EMBL:AHG92758.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
qs_3_scaffold_0_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11300..12142)
DNA (843bp) protein (281aa)
NAD-dependent epimerase n=1 Tax=Salisaeta longa RepID=UPI0003B37FC6
NAD dependent epimerase/dehydratase family
NAD dependent epimerase/dehydratase family {ECO:0000313|EMBL:CBH25141.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qs_3_scaffold_0_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12233..12859
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6V4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23759.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_0_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12932..14650
DNA (1719bp) protein (573aa)
hypothetical protein; K08981 putative membrane protein id=24657528 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Conserved hypohtetical protein containing bacterial membrane flanked domain {ECO:0000313|EMBL:CBH23758.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
qs_3_scaffold_0_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14756..15022
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:ACY48235.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_3_scaffold_0_13
unknown

Not on your lists

comp(15003..15713)
DNA (711bp) protein (237aa)

This feature has no annotations

qs_3_scaffold_0_trna_5
unknown

Not on your lists

comp(15919..15992)
DNA (74bp)
transferRNA
qs_3_scaffold_0_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16488..17921)
DNA (1434bp) protein (478aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Two-component system sensor histidine kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Z2_SALRM
two-component system sensor histidine kinase
qs_3_scaffold_0_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18092..19498)
DNA (1407bp) protein (469aa)
Sigma-54 dependent DNA-binding response regulator, Fis family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Z4_SALRM
sigma-54 dependent DNA-binding response regulator, Fis family
Sigma-54 dependent DNA-binding response regulator, Fis family {ECO:0000313|EMBL:CBH24849.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
qs_3_scaffold_0_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19739..21136
DNA (1398bp) protein (466aa)
ABC transporter permease n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Z5_SALRM
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:CBH24850.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qs_3_scaffold_0_17
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21182..23551
DNA (2370bp) protein (790aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDG6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHM62866.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirga
protein of unknown function DUF214
qs_3_scaffold_0_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23647..24435
DNA (789bp) protein (263aa)
ABC transporter ATP-binding protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9Z7_SALRM
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CBH24852.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qs_3_scaffold_0_19
RLO_PLX_64_10, Bacteria

Not on your lists

24535..26871
DNA (2337bp) protein (779aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003775476
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
qs_3_scaffold_0_20
RLO_PLX_64_10, Bacteria

Not on your lists

26967..29414
DNA (2448bp) protein (816aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QNN8_SPILD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
qs_3_scaffold_0_21
RLO_PLX_64_10, Bacteria

Not on your lists

29520..31910
DNA (2391bp) protein (797aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00036CC00C
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
cell division protein FtsX
qs_3_scaffold_0_22
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32115..32831
DNA (717bp) protein (239aa)
ABC transporter related n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6N8_DYAFD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACT96099.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
qs_3_scaffold_0_23
RLO_PLX_64_10, Bacteria

Not on your lists

32919..35294
DNA (2376bp) protein (792aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003775476
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
qs_3_scaffold_0_24
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35589..36029
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UGD0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KDB53622.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans D
hypothetical protein
qs_3_scaffold_0_25
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

Not on your lists

36112..36621
DNA (510bp) protein (170aa)
RES domain protein id=2621358 bin=GWA2_Elusimicrobia_56_46 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
RES domain-containing protein Tax=GWC2_Elusimicrobia_56_31_curated
hypothetical protein
qs_3_scaffold_0_26
Pyrobaculum oguniense, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

37331..37765
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3CD71
Apolipophorin-III precursor (apoLp-III)
Apolipophorin-III (ApoLp-III) {ECO:0000313|EMBL:AFA39490.1}; TaxID=698757 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobaculum oguniense
qs_3_scaffold_0_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

39096..40280
DNA (1185bp) protein (395aa)
DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:ACY49133.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ACY49133.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
DNA polymerase III, delta prime subunit n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDY9_RHOM4
DNA polymerase III subunit delta'
qs_3_scaffold_0_28
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40391..40870
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI00035FF4A9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC86576.1}; Flags: Precursor;; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="F
qs_3_scaffold_0_29
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

41083..41934
DNA (852bp) protein (284aa)
von Willebrand factor type A n=1 Tax=Salisaeta longa RepID=UPI0003B6C7E1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49130.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
Displaying items 1-30 of 292 in total

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