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qs_3_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 99 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_20_1
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(221..850)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B610EF
Uncharacterized protein {ECO:0000313|EMBL:ESU19664.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cau
hypothetical protein
qs_3_scaffold_20_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1043..2107
DNA (1065bp) protein (355aa)
3-beta hydroxysteroid dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B33CB7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25792.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_20_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2235..2609
DNA (375bp) protein (125aa)
hypothetical protein; K09008 hypothetical protein id=24659071 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized ACR {ECO:0000313|EMBL:CBH24229.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qs_3_scaffold_20_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2624..3919)
DNA (1296bp) protein (432aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFC3_RHOM4
3-phosphoshikimate 1-carboxyvinyltransferase
qs_3_scaffold_20_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4023..5165)
DNA (1143bp) protein (381aa)
Adenosine deaminase {ECO:0000313|EMBL:ABC44258.1}; EC=3.5.4.4 {ECO:0000313|EMBL:ABC44258.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sa
Adenosine deaminase n=2 Tax=Salinibacter ruber RepID=Q2S4S0_SALRD
add; adenosine deaminase
qs_3_scaffold_20_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5347..5715
DNA (369bp) protein (123aa)
Sec-independent protein translocase protein TatA n=2 Tax=Salinibacter ruber RepID=Q2S4S1_SALRD
sec-independent protein transporter
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
qs_3_scaffold_20_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5880..7493
DNA (1614bp) protein (538aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] id=24657538 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000255|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000255|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000255|HAMAP-Rule:MF_00120};; TaxID=309807
amidase
qs_3_scaffold_20_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7583..8461
DNA (879bp) protein (293aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Inc
succinyl-CoA synthetase subsunit alpha n=1 Tax=Salisaeta longa RepID=UPI0003B729EB
sucD; succinyl-CoA synthetase subunit alpha
qs_3_scaffold_20_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8596..9195
DNA (600bp) protein (200aa)
Probable GTP-binding protein EngB n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFB8_RHOM4
small GTP-binding protein
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
qs_3_scaffold_20_10
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

9393..11009
DNA (1617bp) protein (539aa)
serA; D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=GWA2_Ignavibacteriae_55_25_curated
D-3-phosphoglycerate dehydrogenase id=4187956 bin=GWA2_Ignavibacteriae_55_25 species=Capsaspora owczarzaki genus=Capsaspora taxon_order=unknown taxon_class=Ichthyosporea phylum=unknown tax=GWA2_Ignavibacteriae_55_25 organism_group=Ignavibacteria
D-3-phosphoglycerate dehydrogenase
qs_3_scaffold_20_11
unknown

Not on your lists

comp(11017..11544)
DNA (528bp) protein (176aa)

This feature has no annotations

qs_3_scaffold_20_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11650..12663)
DNA (1014bp) protein (338aa)
Thioredoxin reductase {ECO:0000313|EMBL:CBH23764.1}; EC=1.8.1.9 {ECO:0000313|EMBL:CBH23764.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Thioredoxin reductase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6V9_SALRM
trxB; Thioredoxin reductase
qs_3_scaffold_20_13
unknown

Not on your lists

comp(12732..13319)
DNA (588bp) protein (196aa)

This feature has no annotations

qs_3_scaffold_20_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13457..14065)
DNA (609bp) protein (203aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=518766 species="Bacteria; Ba
Dephospho-CoA kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MCY5_RHOM4
dephospho-CoA kinase
qs_3_scaffold_20_15
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14193..14540)
DNA (348bp) protein (116aa)
HIT family hydrolase n=1 Tax=Salisaeta longa RepID=UPI0003B5F13E
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:ABG03709.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="
qs_3_scaffold_20_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14786..15202
DNA (417bp) protein (139aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
6-pyruvoyl tetrahydrobiopterin synthase n=1 Tax=Salisaeta longa RepID=UPI0003B588D9
6-pyruvoyl-tetrahydropterin synthase
qs_3_scaffold_20_17

Not on your lists

15609..17267
DNA (1659bp) protein (553aa)
GTP cyclohydrolase I n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237A4C9
Uncharacterized protein {ECO:0000313|EMBL:KKN67998.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Hypothetical protein
qs_3_scaffold_20_18
unknown

Not on your lists

17337..17474
DNA (138bp) protein (46aa)

This feature has no annotations

qs_3_scaffold_20_19
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17581..17772)
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:CCA59216.1}; TaxID=953739 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC
qs_3_scaffold_20_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18017..18361
DNA (345bp) protein (115aa)
Ferredoxin n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5D3_SALRM
fdxA; ferredoxin
Ferredoxin {ECO:0000313|EMBL:ABC45079.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain DSM
qs_3_scaffold_20_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18485..21445)
DNA (2961bp) protein (987aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711, ECO:0000313|EMBL:CBH24367.1};; Glycine cleavage system P-protein {ECO:0000256|HA
glycine dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B3C4D5
gcvP; glycine dehydrogenase
qs_3_scaffold_20_22
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21786..22517
DNA (732bp) protein (244aa)
GMP synthase-Glutamine amidotransferase domain (EC:6.3.5.2) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
GMP synthase-Glutamine amidotransferase domain (EC:6.3.5.2)
GMP synthase-Glutamine amidotransferase domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EWL3_9BACT
qs_3_scaffold_20_23
bacterium UASB14, Bacteria

Not on your lists

comp(22599..23480)
DNA (882bp) protein (294aa)
NmrA family protein n=1 Tax=Salisaeta longa RepID=UPI0003B6F729
Uncharacterized protein {ECO:0000313|EMBL:GAK52593.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
hypothetical protein
qs_3_scaffold_20_24
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23678..24043
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Streptomyces sp. CcalMP-8W RepID=UPI000367AF98
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIR98270.1}; TaxID=1907 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
qs_3_scaffold_20_25
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24061..24834)
DNA (774bp) protein (258aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:00
Ribonuclease 3 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGH0_RHOM4
ribonuclease III
qs_3_scaffold_20_26
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25005..25412)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGX2_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN74336.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_3_scaffold_20_trna_1
unknown

Not on your lists

25827..25915
DNA (89bp)
transferRNA
qs_3_scaffold_20_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26116..27663
DNA (1548bp) protein (516aa)
transporter n=1 Tax=Salisaeta longa RepID=UPI0003B5FA8C
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ACY46975.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qs_3_scaffold_20_28
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27745..29217
DNA (1473bp) protein (491aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MK63_RHOM4
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACY46976.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rh
qs_3_scaffold_20_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29262..30068
DNA (807bp) protein (269aa)
ABC transporter ATP-binding protein n=2 Tax=Salinibacter ruber RepID=D5HD80_SALRM
ABC transporter ATP-binding protein
ATP-binding protein of ABC transporter {ECO:0000313|EMBL:ABC45784.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
Displaying items 1-30 of 99 in total

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