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qs_3_scaffold_229

Search features with annotation key words

Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_229_1
unknown

Not on your lists

comp(175..552)
DNA (378bp) protein (126aa)

This feature has no annotations

qs_3_scaffold_229_2

Not on your lists

comp(1131..2129)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00035C1C49
Marine sediment metagenome DNA, contig: S01H1_S26174 {ECO:0000313|EMBL:GAG40784.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
qs_3_scaffold_229_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2250..3053
DNA (804bp) protein (268aa)
Transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H533_SALRM
transposase
Transposase {ECO:0000313|EMBL:CBH23138.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
qs_3_scaffold_229_4
unknown

Not on your lists

comp(3364..3570)
DNA (207bp) protein (69aa)

This feature has no annotations

qs_3_scaffold_229_5
unknown

Not on your lists

4392..4586
DNA (195bp) protein (65aa)

This feature has no annotations

qs_3_scaffold_229_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4565..5626)
DNA (1062bp) protein (354aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
dTDP-glucose 4,6-dehydratase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGD0_RHOMR
qs_3_scaffold_229_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5876..8701
DNA (2826bp) protein (942aa)
DNA polymerase I {ECO:0000313|EMBL:ABC43592.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABC43592.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
DNA polymerase I n=1 Tax=Salisaeta longa RepID=UPI0003B4A00C
polA; DNA polymerase I
qs_3_scaffold_229_8
unknown

Not on your lists

8840..9514
DNA (675bp) protein (225aa)

This feature has no annotations

qs_3_scaffold_229_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9728..11065
DNA (1338bp) protein (446aa)
peptidase M16 n=1 Tax=Salisaeta longa RepID=UPI0003B6CDEF
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ACY48237.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_3_scaffold_229_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11185..12468
DNA (1284bp) protein (428aa)
peptidase M16 n=1 Tax=Salisaeta longa RepID=UPI0003B69895
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:AEN73328.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_3_scaffold_229_11
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

12669..13283
DNA (615bp) protein (205aa)
Gll3852 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NEM7_GLOVI
hypothetical protein
Gll3852 protein {ECO:0000313|EMBL:BAC91793.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
qs_3_scaffold_229_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13392..13979)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9P8_SALRM
PspC domain-containing protein
PspC domain family {ECO:0000313|EMBL:ABC45415.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
qs_3_scaffold_229_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14079..14810)
DNA (732bp) protein (244aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedi
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Salisaeta longa RepID=UPI0003B5382B
5-formyltetrahydrofolate cyclo-ligase
qs_3_scaffold_229_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


15005..16420
DNA (1416bp) protein (472aa)
signal recognition particle n=1 Tax=Salisaeta longa RepID=UPI0003B50670
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
qs_3_scaffold_229_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


16543..17271
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4069E
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qs_3_scaffold_229_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17393..17968
DNA (576bp) protein (192aa)
Ribosome maturation factor RimM n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHG4_RHOM4
16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
qs_3_scaffold_229_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18048..18803
DNA (756bp) protein (252aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N1)-methyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B4C3CB
trmD; tRNA (guanine-N(1)-)-methyltransferase
qs_3_scaffold_229_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


18935..19288
DNA (354bp) protein (118aa)
50S ribosomal protein L19 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SI03_RHOMR
50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
qs_3_scaffold_229_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19388..20251
DNA (864bp) protein (288aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=761659 species=
hypothetical protein
hypothetical protein id=24659584 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_3_scaffold_229_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20333..20794
DNA (462bp) protein (154aa)
single-stranded DNA-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B6935F
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qs_3_scaffold_229_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20886..22019
DNA (1134bp) protein (378aa)
Tyrosine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02007}; EC=6.1.1.1 {ECO:0000255|HAMAP-Rule:MF_02007};; Tyrosyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02007}; Short=TyrRS {ECO:0000255|HAMAP-Rule:M
Tyrosine--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=SYY_SALRD
tyrS; tyrosyl-tRNA synthetase
qs_3_scaffold_229_22
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

22115..23014
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J3B0_NOSP7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC83560.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc punctiforme (strain ATCC 29133 / PCC 73102).;"
qs_3_scaffold_229_23
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

23089..24027
DNA (939bp) protein (313aa)
hydrolase TatD n=1 Tax=Mastigocladopsis repens RepID=UPI00035D350C
TatD-like deoxyribonuclease
TatD-related deoxyribonuclease {ECO:0000313|EMBL:ADN14387.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822
qs_3_scaffold_229_24
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

24147..24953
DNA (807bp) protein (269aa)
UbiA prenyltransferase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XCD4_9CHRO
Polyprenyltransferase {ECO:0000313|EMBL:KJH73665.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
UbiA prenyltransferase
qs_3_scaffold_229_25
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25079..26266
DNA (1188bp) protein (396aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000313|EMBL:AFZ29748.1}; EC=4.2.3.4 {ECO:0000313|EMBL:AFZ29748.1};; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;"
3-dehydroquinate synthase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XB73_9CHRO
qs_3_scaffold_229_26
Chlorogloeopsis sp. Cgs-089, Chlorogloeopsis, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

26312..27547
DNA (1236bp) protein (412aa)
Putative uncharacterized protein n=2 Tax=Chlorogloeopsis sp. Cgs-089 RepID=C0KIE6_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:ACM89415.1}; TaxID=592337 species="Bacteria; Cyanobacteria; Stigonematales; Chlorogloeopsis.;" source="Chlorogloeopsis sp. Cgs-089.;"
hypothetical protein
Displaying 26 items

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