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qs_3_scaffold_28

Search features with annotation key words

Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_28_1
unknown

Not on your lists

comp(2..181)
DNA (180bp) protein (60aa)

This feature has no annotations

qs_3_scaffold_28_2
Leptospirillum sp. Group II 'C75', Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(185..856)
DNA (672bp) protein (224aa)
transposase n=1 Tax=Salisaeta longa RepID=UPI0003B38027
transposase
Putative transposase {ECO:0000313|EMBL:EIJ76506.1}; TaxID=1159328 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum sp. Group II 'C75'.;"
qs_3_scaffold_28_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(853..1905)
DNA (1053bp) protein (351aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B38A34
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
qs_3_scaffold_28_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2121..3080)
DNA (960bp) protein (320aa)
ABC transporter substrate-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B733C5
periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ACY47976.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_3_scaffold_28_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3315..3752
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5C6_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45694.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_28_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3814..5565)
DNA (1752bp) protein (584aa)
amidase (EC:3.5.1.4)
Amidase {ECO:0000313|EMBL:AEN72941.1}; EC=3.5.1.4 {ECO:0000313|EMBL:AEN72941.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;
Amidase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG41_RHOMR
qs_3_scaffold_28_7
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6548..6997)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J4T3_CYCMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEL25313.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobac
qs_3_scaffold_28_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7082..9178)
DNA (2097bp) protein (699aa)
Transketolase {ECO:0000313|EMBL:ABC45108.1}; EC=2.2.1.1 {ECO:0000313|EMBL:ABC45108.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Saliniba
Transketolase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5W0_SALRD
tkt; transketolase
qs_3_scaffold_28_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9289..10650)
DNA (1362bp) protein (454aa)
hypothetical protein
hypothetical protein id=24659620 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24787.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_28_10
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10910..11533
DNA (624bp) protein (208aa)
type 11 SAM-dependent methyltransferase Tax=RBG_16_Deltaproteobacteria_47_11_curated
Methyltransferase type 11 id=2058304 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
type 11 SAM-dependent methyltransferase
qs_3_scaffold_28_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11703..13340
DNA (1638bp) protein (546aa)
trpE; anthranilate synthase; K01657 anthranilate synthase component I [EC:4.1.3.27] id=24659621 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Anthranilate synthase component I {ECO:0000313|EMBL:ABC43625.1}; EC=4.1.3.27 {ECO:0000313|EMBL:ABC43625.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
trpE; anthranilate synthase component I
qs_3_scaffold_28_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13549..14169
DNA (621bp) protein (207aa)
hypothetical protein
hypothetical protein id=24659622 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24789.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_28_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14243..15307
DNA (1065bp) protein (355aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophan--tRNA ligase n=2 Tax=Salinibacter ruber RepID=D5H9T5_SALRM
trpS; tryptophanyl-tRNA synthetase
qs_3_scaffold_28_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15628..16284
DNA (657bp) protein (219aa)
glutamine amidotransferase of anthranilate synthase (EC:4.1.3.27)
Glutamine amidotransferase of anthranilate synthase {ECO:0000313|EMBL:AEN73744.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AEN73744.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. In
Glutamine amidotransferase of anthranilate synthase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHY6_RHOMR
qs_3_scaffold_28_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16311..17348
DNA (1038bp) protein (346aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=761659 spe
anthranilate phosphoribosyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B4ACF1
trpD; anthranilate phosphoribosyltransferase
qs_3_scaffold_28_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17432..18244
DNA (813bp) protein (271aa)
trpC; Indole-3-glycerol phosphate synthase; K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] id=24659626 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Indole-3-glycerol phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00134}; Short=IGPS {ECO:0000255|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000255|HAMAP-Rule:MF_00134};; TaxID=309807 species="Bacteria; B
trpC; indole-3-glycerol phosphate synthase
qs_3_scaffold_28_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18280..18936
DNA (657bp) protein (219aa)
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_0013
N-(5'-phosphoribosyl)anthranilate isomerase n=2 Tax=Rhodothermus marinus RepID=G2SHY3_RHOMR
qs_3_scaffold_28_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19010..20239
DNA (1230bp) protein (410aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:CBH24795.1}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:CBH24795.1};; TaxID=761659 species="Bacter
Tryptophan synthase beta chain n=2 Tax=Salinibacter ruber RepID=D5H9U0_SALRM
trpB; tryptophan synthase subunit beta
qs_3_scaffold_28_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20309..21220
DNA (912bp) protein (304aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; TaxID=29549 species="Ba
tryptophan synthase subunit alpha (EC:4.2.1.20)
tryptophan synthase susbunit alpha n=1 Tax=Salisaeta longa RepID=UPI0003B5FC44
qs_3_scaffold_28_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21334..22488
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHY0_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN73738.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_3_scaffold_28_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22586..23521
DNA (936bp) protein (312aa)
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHX9_RHOMR
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; E
qs_3_scaffold_28_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23595..24038
DNA (444bp) protein (148aa)
hypothetical protein
hypothetical protein id=24659631 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24798.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_28_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24057..26048)
DNA (1992bp) protein (664aa)
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:ABC43925.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABC43925.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
helicase n=1 Tax=Salisaeta longa RepID=UPI0003B503D4
ATP-dependent DNA helicase RecQ
qs_3_scaffold_28_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26413..27501
DNA (1089bp) protein (363aa)
glycosyl transferase family protein
glycosyl transferase family protein; K07011 id=24659633 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:ABC45193.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
qs_3_scaffold_28_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27535..28521)
DNA (987bp) protein (329aa)
Integral membrane protein DUF6 n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1Y7_SALRD
hypothetical protein
Integral membrane protein DUF6 {ECO:0000313|EMBL:ABC45741.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qs_3_scaffold_28_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28712..29140)
DNA (429bp) protein (143aa)
hypothetical protein
hypothetical protein id=24659635 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24801.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_28_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29296..30312)
DNA (1017bp) protein (339aa)
Putative (NAD+) isocitrate dehydrogenase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1Y5_SALRD
(NAD+) isocitrate dehydrogenase
Putative (NAD+) isocitrate dehydrogenase {ECO:0000313|EMBL:ABC44228.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qs_3_scaffold_28_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30459..30929)
DNA (471bp) protein (157aa)
biopolymer transporter ExbD n=1 Tax=Salisaeta longa RepID=UPI0003B44A76
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC43809.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_28_29
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31010..31594)
DNA (585bp) protein (195aa)
biopolymer transporter ExbD n=1 Tax=Salisaeta longa RepID=UPI0003B4C17C
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ACY48604.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qs_3_scaffold_28_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31741..32013)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B79082
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24805.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying items 1-30 of 45 in total

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