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qs_3_scaffold_541

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_541_1
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2..88)
DNA (87bp) protein (29aa)
tuf; elongation factor Tu
elongation factor Tu id=3914425 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia;
qs_3_scaffold_541_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(229..2340)
DNA (2112bp) protein (704aa)
elongation factor P n=1 Tax=Salisaeta longa RepID=UPI0003B6E354
fusA; translation elongation factor G (EF-G)
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
qs_3_scaffold_541_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2462..2974)
DNA (513bp) protein (171aa)
30S ribosomal protein S7 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGV0_RHOM4
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_3_scaffold_541_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3036..3410)
DNA (375bp) protein (125aa)
rpsL; 30S ribosomal protein S12
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=24658953 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qs_3_scaffold_541_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3587..5854)
DNA (2268bp) protein (756aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
ATPase AAA n=1 Tax=Salisaeta longa RepID=UPI0003B3A6FB
qs_3_scaffold_541_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(6153..8861)
DNA (2709bp) protein (903aa)
Tetratricopeptide TPR_4 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGU7_RHOM4
hypothetical protein
Tetratricopeptide TPR_4 {ECO:0000313|EMBL:ACY47732.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_3_scaffold_541_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(9033..10487)
DNA (1455bp) protein (485aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; R
pyruvate kinase n=1 Tax=Salisaeta longa RepID=UPI0003B6E51C
qs_3_scaffold_541_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(10574..11707)
DNA (1134bp) protein (378aa)
IS605 family transposase orfB
IS605 family transposase orfB; K07496 putative transposase id=24657500 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
IS605 family transposase orfB {ECO:0000313|EMBL:ABC45421.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_3_scaffold_541_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(11994..13271)
DNA (1278bp) protein (426aa)
Peptidase, M50 family protein {ECO:0000313|EMBL:ABC46174.1}; EC=3.4.24.- {ECO:0000313|EMBL:ABC46174.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
Peptidase, M50 family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3S3_SALRD
peptidase, M50 family protein
Displaying 9 items

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