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qs_3_scaffold_85

Search features with annotation key words

Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_85_1
unknown

Not on your lists

2..85
DNA (84bp) protein (28aa)

This feature has no annotations

qs_3_scaffold_85_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

245..712
DNA (468bp) protein (156aa)
Translation initiation factor IF-3 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD35_SALRM
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
qs_3_scaffold_85_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


1104..1295
DNA (192bp) protein (64aa)
50S ribosomal protein L35 n=1 Tax=Salisaeta longa RepID=UPI0003B34C3C
hypothetical protein
50S ribosomal protein L35 {ECO:0000255|HAMAP-Rule:MF_00514}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_3_scaffold_85_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


1447..1794
DNA (348bp) protein (116aa)
rplT; 50S ribosomal protein L20
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 id=24658753 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qs_3_scaffold_85_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


1997..3028
DNA (1032bp) protein (344aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD39_SALRM
pheS; phenylalanyl-tRNA synthetase subunit alpha
qs_3_scaffold_85_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


3099..5642
DNA (2544bp) protein (848aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD40_SALRM
pheT; phenylalanyl-tRNA synthetase subunit beta
qs_3_scaffold_85_7
unknown

Not on your lists

comp(5772..6158)
DNA (387bp) protein (129aa)

This feature has no annotations

qs_3_scaffold_85_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6193..6585
DNA (393bp) protein (131aa)
hypothetical protein; K09888 cell division protein ZapA id=24658757 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_3_scaffold_85_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6846..9329
DNA (2484bp) protein (828aa)
ccmF; cytochrome c-type biogenesis protein ccmF
ccmF; cytochrome c-type biogenesis protein ccmF; K02198 cytochrome c-type biogenesis protein CcmF id=24658083 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cytochrome c biogenesis factor {ECO:0000313|EMBL:ABC45743.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qs_3_scaffold_85_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9416..9907)
DNA (492bp) protein (164aa)
hypothetical protein
hypothetical protein id=24658096 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25297.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_85_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10087..10914
DNA (828bp) protein (276aa)
Thioredoxin n=2 Tax=Salinibacter ruber RepID=Q2S0L9_SALRD
Thioredoxin
Thioredoxin {ECO:0000313|EMBL:CBH25299.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
qs_3_scaffold_85_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10956..12008)
DNA (1053bp) protein (351aa)
phosphotransferase enzyme family protein id=24658100 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
phosphotransferase enzyme family protein
Phosphotransferase enzyme family protein {ECO:0000313|EMBL:ABC45785.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qs_3_scaffold_85_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12005..12820)
DNA (816bp) protein (272aa)
mtnP; 5'-methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] id=24658101 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
5'-methylthioadenosine phosphorylase II {ECO:0000313|EMBL:CBH25302.1}; EC=2.4.2.28 {ECO:0000313|EMBL:CBH25302.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis
mtnP; 5'-methylthioadenosine phosphorylase
qs_3_scaffold_85_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12856..13845)
DNA (990bp) protein (330aa)
Protein ADP-ribosylarginine hydrolase n=2 Tax=Salinibacter ruber RepID=D5HBD0_SALRM
ADP-ribosylglycohydrolase
ADP-ribosylglycohydrolase, putative {ECO:0000313|EMBL:ABC43837.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qs_3_scaffold_85_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13911..14582
DNA (672bp) protein (224aa)
ccmB; Heme exporter protein B
ccmB; Heme exporter protein B; K02194 heme exporter protein B id=24658131 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Heme exporter protein B {ECO:0000313|EMBL:CBH25334.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_85_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14826..15569
DNA (744bp) protein (248aa)
Cytochrome c assembly protein n=2 Tax=Rhodothermus marinus RepID=D0MF48_RHOM4
cytochrome c assembly protein
Cytochrome c assembly protein {ECO:0000313|EMBL:ACY49304.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qs_3_scaffold_85_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15618..15890
DNA (273bp) protein (91aa)
hypothetical protein
hypothetical protein id=24658133 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25337.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_85_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15972..16376
DNA (405bp) protein (135aa)
cytochrome c-type biogenesis protein CcmE
ccmE; heme exporter protein E; K02197 cytochrome c-type biogenesis protein CcmE id=24658134 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cytochrome c-type biogenesis protein CcmE, putative {ECO:0000313|EMBL:ABC45822.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
qs_3_scaffold_85_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16431..16778
DNA (348bp) protein (116aa)
hypothetical protein
hypothetical protein id=24658135 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25339.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_85_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16824..18215)
DNA (1392bp) protein (464aa)
magnesium transporter n=1 Tax=Salisaeta longa RepID=UPI0003B524F9
mgtE; magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_3_scaffold_85_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(18345..19166)
DNA (822bp) protein (274aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Salinibacter ruber RepID=RSMA_SALRD
ksgA; dimethyladenosine transferase
qs_3_scaffold_85_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19257..20387)
DNA (1131bp) protein (377aa)
von Willebrand factor type A n=1 Tax=Salisaeta longa RepID=UPI0003B32474
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC46152.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_85_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20911..22155)
DNA (1245bp) protein (415aa)
hypothetical protein
hypothetical protein id=24658139 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25343.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_85_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22460..23044)
DNA (585bp) protein (195aa)
biotin biosynthesis protein BioY n=1 Tax=Salisaeta longa RepID=UPI0003B588A6
bioY; BioY protein
BioY protein {ECO:0000313|EMBL:CBH23828.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M
qs_3_scaffold_85_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23323..24045
DNA (723bp) protein (241aa)
Uncharacterized protein {ECO:0000313|EMBL:AEW06762.1}; EC=3.6.3.28 {ECO:0000313|EMBL:AEW06762.1};; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Inc
ABC transporter n=1 Tax=Salisaeta longa RepID=UPI0003B3E14B
macB; macrolide export ATP-binding protein/permease MacB
qs_3_scaffold_85_26
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

24130..25491
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B6A74A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF13868.1}; Flags: Precursor;; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton tha
qs_3_scaffold_85_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25540..26259)
DNA (720bp) protein (240aa)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:000025
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H667_SALRM
purQ; phosphoribosylformylglycinamidine synthase I
qs_3_scaffold_85_28
Prevotella sp. CAG:732, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26693..27733
DNA (1041bp) protein (347aa)
Site-specific recombinase XerD n=1 Tax=Prevotella sp. CAG:732 RepID=R6XJM9_9BACT
Site-specific recombinase XerD {ECO:0000313|EMBL:CDD19314.1}; TaxID=1262934 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="P
site-specific recombinase XerD
qs_3_scaffold_85_29
unknown

Not on your lists

27730..28695
DNA (966bp) protein (322aa)

This feature has no annotations

qs_3_scaffold_85_30
Cellulophaga lytica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28865..29146
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI000373287C
DNA-binding domain-containing protein
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:ADY31027.1}; TaxID=867900 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source
Displaying items 1-30 of 37 in total

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