ggKbase home page

qs_3_scaffold_1060

Search features with annotation key words

Displaying 8 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_1060_1
RLO_PLX_64_10, Bacteria

Not on your lists

comp(3..1139)
DNA (1137bp) protein (379aa)
two component sigma54 specific Fis family transcriptional regulator; K11384 two-component system, NtrC family, response regulator AlgB Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Alginate biosynthesis transcriptional regulatory protein algB id=4025046 bin=GWA2_Deltaproteo_65_63 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
qs_3_scaffold_1060_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1157..1303)
DNA (147bp) protein (49aa)
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:ABC44494.1}; EC=6.4.1.2 {ECO:0000313|EMBL:ABC44494.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
accC; acetyl-CoA carboxylase, biotin carboxylase
accC; acetyl-CoA carboxylase, biotin carboxylase id=24657318 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_3_scaffold_1060_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1432..2421
DNA (990bp) protein (330aa)
DnaJ protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5B9_SALRD
dnaJ; dnaJ protein
DnaJ protein {ECO:0000313|EMBL:ABC45268.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain D
qs_3_scaffold_1060_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2885..3466
DNA (582bp) protein (194aa)
hypothetical protein
hypothetical protein id=24657316 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH23463.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_1060_5
Halobacillus karajensis, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3765..4469
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Halobacillus sp. BAB-2008 RepID=L5N7K8_9BACI
Uncharacterized protein {ECO:0000313|EMBL:CDQ24014.1}; TaxID=195088 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Halobacillus.;" source="Halobacillus karajensis.;"
hypothetical protein
qs_3_scaffold_1060_6
unknown

Not on your lists

comp(4382..4999)
DNA (618bp) protein (206aa)

This feature has no annotations

qs_3_scaffold_1060_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5109..6734
DNA (1626bp) protein (542aa)
putP; sodium:proline symporter
putP; sodium:proline symporter id=24658728 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Sodium:proline symporter {ECO:0000313|EMBL:CBH25914.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qs_3_scaffold_1060_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6806..6940)
DNA (135bp) protein (45aa)
ABC transporter, ATP-binding protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD43_SALRM
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CBH25948.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
Displaying 8 items

View Taxonomy