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qs_3_scaffold_108

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_108_1
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61..240)
DNA (180bp) protein (60aa)
Putative FAD binding dehydrogenase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TXI4_9BRAD
hypothetical protein; K07077 Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
hypothetical protein
qs_3_scaffold_108_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(295..696)
DNA (402bp) protein (134aa)
hypothetical protein
hypothetical protein id=24658222 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25426.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_108_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(746..1600)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B48898
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC46099.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_108_4
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1825..4293)
DNA (2469bp) protein (823aa)
ATP-dependent protease n=1 Tax=Salisaeta longa RepID=UPI0003B71E21
ATP-dependent protease
ATP-dependent protease, putative {ECO:0000313|EMBL:ABG04876.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" sourc
qs_3_scaffold_108_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4810..6588)
DNA (1779bp) protein (593aa)
Sulphate transporter n=2 Tax=Salinibacter ruber RepID=D5HBI3_SALRM
sul1; sulfate transporter
Sulfate transporter {ECO:0000313|EMBL:ABC46134.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qs_3_scaffold_108_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6737..7630)
DNA (894bp) protein (298aa)
aroE; shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] id=24658220 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Shikimate dehydrogenase (NADP(+)) {ECO:0000255|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000255|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000255|HAMAP-Rule:MF_00222};; TaxID=309807 species="Bacteria; Bacte
aroE; shikimate 5-dehydrogenase
qs_3_scaffold_108_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7678..9810)
DNA (2133bp) protein (711aa)
cat5; cationic amino acid transporter
cat5; cationic amino acid transporter id=24658218 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cationic amino acid transporter {ECO:0000313|EMBL:CBH25422.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
qs_3_scaffold_108_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9963..12170)
DNA (2208bp) protein (736aa)
cat4; cationic amino acid transporter
cat4; cationic amino acid transporter id=24658217 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cationic amino acid transporter {ECO:0000313|EMBL:CBH25421.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
qs_3_scaffold_108_9
unknown

Not on your lists

comp(12278..12436)
DNA (159bp) protein (53aa)

This feature has no annotations

qs_3_scaffold_108_10
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12661..16074)
DNA (3414bp) protein (1138aa)
heme-binding protein n=1 Tax=Spirosoma luteum RepID=UPI0003794C16
Heme-binding protein {ECO:0000313|EMBL:AKD53775.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
heme-binding protein
qs_3_scaffold_108_11
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16709..20098
DNA (3390bp) protein (1130aa)
Heme-binding protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KC35_9BACT
Heme-binding protein {ECO:0000313|EMBL:AHM62746.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgacea
heme-binding protein
qs_3_scaffold_108_12
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20116..21501)
DNA (1386bp) protein (462aa)
Oxidoreductase domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZF7_HALH1
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AHW59280.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
qs_3_scaffold_108_13
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21874..23334)
DNA (1461bp) protein (487aa)
Putative NADH-dependent dehydrogenase n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZTH1_9BACT
Putative NADH-dependent dehydrogenase {ECO:0000313|EMBL:EON77425.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" sour
oxidoreductase domain-containing protein
qs_3_scaffold_108_14
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23399..25393)
DNA (1995bp) protein (665aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYI4_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE49425.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
qs_3_scaffold_108_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26048..28009)
DNA (1962bp) protein (654aa)
Transporter, monovalent cation:proton antiporter-2 (CPA2) family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S0C0_SALRD
nhaP; transporter, monovalent cation:proton antiporter-2 (CPA2) family
Transporter, monovalent cation:proton antiporter-2 (CPA2) family {ECO:0000313|EMBL:CBH25404.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
qs_3_scaffold_108_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28238..29617
DNA (1380bp) protein (460aa)
gdhA; glutamate dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] id=24658199 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
gdhA; glutamate dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185, ECO:0000313|EMBL:CBH25403.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibact
qs_3_scaffold_108_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30018..30497
DNA (480bp) protein (160aa)
hypothetical protein
hypothetical protein id=24658198 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25402.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_108_18
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30587..31759)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B37F01
Uncharacterized protein {ECO:0000313|EMBL:EDM76484.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesio
hypothetical protein
qs_3_scaffold_108_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32138..34195
DNA (2058bp) protein (686aa)
susB; alpha-glucosidase; K01187 alpha-glucosidase [EC:3.2.1.20] id=24658197 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
susB; alpha-glucosidase
Alpha-glucosidase {ECO:0000313|EMBL:CBH25401.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (str
qs_3_scaffold_108_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(34248..34730)
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HBJ5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25400.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_108_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(35158..35442)
DNA (285bp) protein (95aa)
GIY-YIG catalytic domain-containing protein
GIY-YIG catalytic domain-containing protein; K07461 putative endonuclease id=24658189 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
GIY-YIG catalytic domain, putative {ECO:0000313|EMBL:ABC44461.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
qs_3_scaffold_108_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

35557..35835
DNA (279bp) protein (93aa)
AsnC family transcriptional regulator
AsnC family transcriptional regulator id=24658188 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:CBH25393.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qs_3_scaffold_108_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(35933..38482)
DNA (2550bp) protein (850aa)
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain id=24658187 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain {ECO:0000313|EMBL:CBH25392.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
qs_3_scaffold_108_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

38681..38959
DNA (279bp) protein (93aa)
hypothetical protein
hypothetical protein id=24658186 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25391.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_108_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(38996..39490)
DNA (495bp) protein (165aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HBI4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25389.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_108_26
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(39527..39802)
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KKD39950.1}; TaxID=1637645 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Limnoraphis.;" source="Limnoraphis robusta CS-951.;"
putative helicase
DNA methyltransferase/helicase id=2256080 bin=GWB2_Clostridiales_37_7 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
qs_3_scaffold_108_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

40138..40809
DNA (672bp) protein (224aa)
hypothetical protein
hypothetical protein id=24658184 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25390.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_108_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

41082..41627
DNA (546bp) protein (182aa)
motB; Motility protein B
motB; Motility protein B; K02557 chemotaxis protein MotB id=24658181 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Motility protein B {ECO:0000313|EMBL:CBH25386.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
qs_3_scaffold_108_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(41747..42493)
DNA (747bp) protein (249aa)
HAD superfamily (Subfamily IA) hydrolase n=2 Tax=Salinibacter ruber RepID=D5HBI0_SALRM
HAD-superfamily hydrolase
HAD superfamily (Subfamily IA) hydrolase {ECO:0000313|EMBL:CBH25385.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qs_3_scaffold_108_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(42739..45984)
DNA (3246bp) protein (1082aa)
MdsD protein; K08676 tricorn protease [EC:3.4.21.-] id=24658179 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
MdsD protein, putative {ECO:0000313|EMBL:CBH25384.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
MdsD protein
Displaying items 1-30 of 35 in total

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