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qs_3_scaffold_139

Search features with annotation key words

Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_139_1
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..279
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Halomonas lutea RepID=UPI00035D4814
hypothetical protein Tax=DS1215_Halomonas_54_146
RES domain protein
qs_3_scaffold_139_2
unknown

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506..1831
DNA (1326bp) protein (442aa)

This feature has no annotations

qs_3_scaffold_139_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1917..3734)
DNA (1818bp) protein (606aa)
outer membrane protein, OMP85 family protein
outer membrane protein, OMP85 family protein id=24658056 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Outer membrane protein, OMP85 family protein {ECO:0000313|EMBL:CBH25261.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
qs_3_scaffold_139_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3874..4131
DNA (258bp) protein (86aa)
hypothetical protein
hypothetical protein id=24658057 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25260.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_139_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4175..5392
DNA (1218bp) protein (406aa)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:ABC46020.1}; EC=3.2.2.- {ECO:0000313|EMBL:ABC46020.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
A/G-specific adenine DNA glycosylase n=2 Tax=Salinibacter ruber RepID=D5HB57_SALRM
mutY; A/G-specific adenine glycosylase
qs_3_scaffold_139_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5458..5967)
DNA (510bp) protein (170aa)
hypothetical protein
hypothetical protein id=24658059 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25263.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_139_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6092..6577)
DNA (486bp) protein (162aa)
hypothetical protein
hypothetical protein id=24658060 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25264.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_139_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7184..7474
DNA (291bp) protein (97aa)
groS; chaperonin, 10 kDa
groS; 10 kDa chaperonin; K04078 chaperonin GroES id=24658061 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=761659 speci
qs_3_scaffold_139_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7569..9254
DNA (1686bp) protein (562aa)
60 kDa chaperonin n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5B3_SALRM
groL; 60 kDa chaperonin
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=761659 speci
qs_3_scaffold_139_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9392..10921)
DNA (1530bp) protein (510aa)
lcfA; acyl-CoA synthetase (NDP forming)
lcfA; acyl-CoA synthetase (NDP forming); K09181 hypothetical protein id=24658063 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ABC43696.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qs_3_scaffold_139_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10975..12132)
DNA (1158bp) protein (386aa)
Acyl-CoA synthetase (NDP forming) {ECO:0000313|EMBL:CBH25267.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CBH25267.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
lcfA; acyl-CoA synthetase (NDP forming)
lcfA; acyl-CoA synthetase (NDP forming); K09181 hypothetical protein id=24658063 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_3_scaffold_139_12
unknown

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12579..12719
DNA (141bp) protein (47aa)

This feature has no annotations

qs_3_scaffold_139_13
unknown

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comp(12875..13168)
DNA (294bp) protein (98aa)

This feature has no annotations

qs_3_scaffold_139_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13253..14938)
DNA (1686bp) protein (562aa)
ATPase
Putative ATPase {ECO:0000313|EMBL:CBH25269.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strai
ATPase; K06915 id=24658065 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_3_scaffold_139_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15060..15305)
DNA (246bp) protein (82aa)
hypothetical protein
hypothetical protein id=24658066 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25270.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_139_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15408..16505)
DNA (1098bp) protein (366aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000255|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000255|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000255|HA
Probable dual-specificity RNA methyltransferase RlmN n=2 Tax=Salinibacter ruber RepID=RLMN_SALRD
radical SAM protein
qs_3_scaffold_139_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16835..18124
DNA (1290bp) protein (430aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|RuleBase:RU000580}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|RuleB
Histidinol dehydrogenase n=2 Tax=Salinibacter ruber RepID=D5HB67_SALRM
hisD; histidinol dehydrogenase
qs_3_scaffold_139_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18443..19567
DNA (1125bp) protein (375aa)
hisC; histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] id=24658069 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023, ECO:0000313|EMBL:CBH25273.1}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023, ECO:0000313|EMBL:CBH25273.1};; Imidazole acetol-phosp
hisC; histidinol-phosphate aminotransferase
qs_3_scaffold_139_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19657..20262
DNA (606bp) protein (202aa)
Uncharacterized ACR n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HB69_SALRM
hypothetical protein
Uncharacterized ACR {ECO:0000313|EMBL:CBH25274.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qs_3_scaffold_139_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20413..22056
DNA (1644bp) protein (548aa)
Putative cysteine ligase BshC {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275526}; EC=6.-.-.- {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275528};; TaxID=761659 species="Bact
UPF0747 protein SRU_2130 n=2 Tax=Salinibacter ruber RepID=Y2130_SALRD
hypothetical protein
qs_3_scaffold_139_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22151..22816
DNA (666bp) protein (222aa)
HD domain protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S0P4_SALRD
HD domain-containing protein
HD domain protein {ECO:0000313|EMBL:ABC44995.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (str
qs_3_scaffold_139_22
unknown

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22822..23544
DNA (723bp) protein (241aa)

This feature has no annotations

qs_3_scaffold_139_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23471..24331)
DNA (861bp) protein (287aa)
punA; Purine nucleoside phosphorylase 1; K03783 purine-nucleoside phosphorylase [EC:2.4.2.1] id=24658073 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477, ECO:0000313|EMBL:CBH25276.1};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR00047
punA; Purine nucleoside phosphorylase 1
qs_3_scaffold_139_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24654..25889)
DNA (1236bp) protein (412aa)
hypothetical protein
hypothetical protein id=24658074 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25277.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_139_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25956..26633)
DNA (678bp) protein (226aa)
recX; Regulatory protein RecX
recX; Regulatory protein RecX; K03565 regulatory protein id=24658075 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qs_3_scaffold_139_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26818..27774)
DNA (957bp) protein (319aa)
hypothetical protein
hypothetical protein id=24658076 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25279.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_139_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27820..30468)
DNA (2649bp) protein (883aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HB75_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25280.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_139_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30704..31906)
DNA (1203bp) protein (401aa)
Sigma factor regulatory protein, FecR/PupR family n=2 Tax=Salinibacter ruber RepID=Q2S0N8_SALRD
Fe2+-dicitrate sensor membrane protein
Putative Fe2+-dicitrate sensor, membrane component {ECO:0000313|EMBL:CBH25281.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;
qs_3_scaffold_139_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32050..32604)
DNA (555bp) protein (185aa)
rpoD; RNA polymerase sigma factor
rpoD; RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=24658079 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma factor {ECO:0000313|EMBL:CBH25282.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_3_scaffold_139_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32934..33218
DNA (285bp) protein (95aa)
hypothetical protein
hypothetical protein id=24658080 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25283.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying items 1-30 of 32 in total

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