ggKbase home page

qs_3_scaffold_155

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_155_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2..418
DNA (417bp) protein (139aa)
rpoC; DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=24659719 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:
rpoC; DNA-directed RNA polymerase subunit beta'
qs_3_scaffold_155_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

533..2005
DNA (1473bp) protein (491aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HA35_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24890.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_155_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2130..3524
DNA (1395bp) protein (465aa)
Sodium:dicarboxylate symporter n=2 Tax=Salinibacter ruber RepID=D5HA34_SALRM
gltP; sodium:dicarboxylate symporter
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:CBH24889.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qs_3_scaffold_155_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3643..5037
DNA (1395bp) protein (465aa)
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:CBH24888.1}; EC=4.1.99.3 {ECO:0000313|EMBL:CBH24888.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
Deoxyribodipyrimidine photo-lyase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HA33_SALRM
phrB; deoxyribodipyrimidine photo-lyase
qs_3_scaffold_155_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5021..5305
DNA (285bp) protein (95aa)
hypothetical protein
hypothetical protein id=24659715 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24887.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_155_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5450..5683)
DNA (234bp) protein (78aa)
hypothetical protein
hypothetical protein id=24659713 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24885.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_155_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5928..6437
DNA (510bp) protein (170aa)
hypothetical protein
hypothetical protein id=24659712 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24884.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_155_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6646..8154
DNA (1509bp) protein (503aa)
Peptidase, M20/M25/M40 family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1R4_SALRD
hypothetical protein
Peptidase, M20/M25/M40 family {ECO:0000313|EMBL:ABC44628.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_3_scaffold_155_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8364..9920
DNA (1557bp) protein (519aa)
dacB; D-alanyl-D-alanine carboxypeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] id=24659710 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
D-alanyl-D-alanine carboxypeptidase [Precursor] {ECO:0000313|EMBL:CBH24882.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CBH24882.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
dacB; D-alanyl-D-alanine carboxypeptidase
qs_3_scaffold_155_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10018..10563)
DNA (546bp) protein (182aa)
spmB; spore maturation protein B
spmB; spore maturation protein B; K06374 spore maturation protein B id=24659709 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Spore maturation protein B {ECO:0000313|EMBL:CBH24881.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qs_3_scaffold_155_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10655..11683)
DNA (1029bp) protein (343aa)
spmA; spore maturation protein A
spmA; spore maturation protein A; K06373 spore maturation protein A id=24659708 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Spore maturation protein A {ECO:0000313|EMBL:CBH24879.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qs_3_scaffold_155_12
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11906..13414)
DNA (1509bp) protein (503aa)
Transcriptional regulator, GntR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZR3_RUBXD
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABG03115.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;"
qs_3_scaffold_155_13
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13604..16705
DNA (3102bp) protein (1034aa)
TonB-dependent receptor n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JJ86_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:ELR68860.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
SusC/RagA family TonB-linked outer membrane protein
qs_3_scaffold_155_14
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16757..18184
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JMX3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR68859.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
qs_3_scaffold_155_15
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18219..19265
DNA (1047bp) protein (349aa)
Beta-lactamase {ECO:0000313|EMBL:EON76014.1}; EC=3.5.2.6 {ECO:0000313|EMBL:EON76014.1};; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclo
Beta-lactamase n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZPQ9_9BACT
beta-lactamase class A
qs_3_scaffold_155_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19322..20362
DNA (1041bp) protein (347aa)
hypothetical protein
oxidoreductase id=24659706 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24878.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_155_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20491..21765
DNA (1275bp) protein (425aa)
sulfolipid synthase
sulfolipid synthase id=24657295 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative sulfolipid synthase {ECO:0000313|EMBL:ABC44424.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_3_scaffold_155_18
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

21977..22909
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI000369D70D
Sulfotransferase domain protein {ECO:0000313|EMBL:EKU97445.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.
sulfotransferase
qs_3_scaffold_155_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22926..24014
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAF7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25012.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_155_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24075..24557
DNA (483bp) protein (161aa)
rluD; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
rluD; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=24659705 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:CBH24877.1}; EC=5.4.99.- {ECO:0000313|EMBL:CBH24877.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incer
Displaying 20 items

View Taxonomy