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qs_3_scaffold_232

Search features with annotation key words

Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_232_1
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(749..1039)
DNA (291bp) protein (97aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CYF2_TRURR
CRISPR-associated protein Cas2
qs_3_scaffold_232_2
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1042..2130)
DNA (1089bp) protein (363aa)
CRISPR-associated endonuclease Cas1 n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LG37_9CYAN
hypothetical protein; K15342 CRISP-associated protein Cas1 Tax=CG_Delta_01
CRISPR-associated protein Cas1
qs_3_scaffold_232_3
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2145..2768)
DNA (624bp) protein (208aa)
CRISPR-associated protein Cas4 n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C3T1_NITHN
CRISPR-associated protein Cas4
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:ADE15053.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus h
qs_3_scaffold_232_4
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(2819..3331)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HRA1_CYAP4
Uncharacterized protein {ECO:0000313|EMBL:KIJ75583.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
qs_3_scaffold_232_5
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3490..4362)
DNA (873bp) protein (291aa)
CRISPR-associated protein, Csd2 family n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RL64_MOOTA
CRISPR-associated Csh2 family protein
CRISPR-associated protein, Csd2 family {ECO:0000313|EMBL:ABC18825.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.
qs_3_scaffold_232_6
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4411..6093)
DNA (1683bp) protein (561aa)
CRISPR-associated protein, Csd1 family n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5DZ75_9FIRM
CRISPR-associated protein, Csd1 family {ECO:0000313|EMBL:CCU78373.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium
CRISPR-associated Csd1 family protein
qs_3_scaffold_232_7
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6133..6795)
DNA (663bp) protein (221aa)
CRISPR-associated protein, Cas5d family n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5DY05_9FIRM
CRISPR-associated protein, Cas5d family {ECO:0000313|EMBL:CCU78371.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobiu
CRISPR-associated Csd1 family protein
qs_3_scaffold_232_8
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6836..7288)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhodopirellula europaea SH398 RepID=M5SB22_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EMB17875.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula eu
hypothetical protein
qs_3_scaffold_232_9
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7632..9863)
DNA (2232bp) protein (744aa)
CRISPR-associated helicase, Cas3 family n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RL61_MOOTA
CRISPR-associated helicase Cas3
CRISPR-associated helicase, Cas3 family {ECO:0000313|EMBL:ABC18828.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella
qs_3_scaffold_232_10
unknown

Not on your lists

comp(9888..10328)
DNA (441bp) protein (147aa)

This feature has no annotations

qs_3_scaffold_232_11
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10279..11319)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037E239D
Uncharacterized protein {ECO:0000313|EMBL:CCH51598.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
transcriptional regulator protein-like protein
qs_3_scaffold_232_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11819..13126)
DNA (1308bp) protein (436aa)
ftsZ; cell division protein FtsZ
ftsZ; cell division protein FtsZ; K03531 cell division protein FtsZ id=24657414 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
qs_3_scaffold_232_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13385..14644)
DNA (1260bp) protein (420aa)
Cell division protein ftsA n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6B4_SALRM
ftsA; cell division protein ftsA
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101, ECO:0000313|EMBL:CBH23569.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qs_3_scaffold_232_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14790..15569)
DNA (780bp) protein (260aa)
ftsQ protein
ftsQ protein; K03589 cell division protein FtsQ id=24657412 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Cell division protein FtsQ {ECO:0000255|HAMAP-Rule:MF_00911}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qs_3_scaffold_232_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15707..17128)
DNA (1422bp) protein (474aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|SAAS:SAAS00243344, ECO:0000313|EMBL:CBH23567.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bactero
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6B2_SALRM
murC; UDP-N-acetylmuramate--L-alanine ligase
qs_3_scaffold_232_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17205..18344)
DNA (1140bp) protein (380aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000255|HAMAP-Rule:MF_00033}; EC=2.4.1.227 {ECO:0000255|HAMAP-Rule:MF_00033};;
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=MURG_SALRD
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
qs_3_scaffold_232_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18458..19606)
DNA (1149bp) protein (383aa)
Cell division protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6B1_SALRM
ftsW; cell division protein
Cell division protein {ECO:0000313|EMBL:CBH23566.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qs_3_scaffold_232_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19702..21084)
DNA (1383bp) protein (461aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6B0_SALRM
murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase
qs_3_scaffold_232_19
unknown

Not on your lists

comp(21229..21330)
DNA (102bp) protein (34aa)

This feature has no annotations

qs_3_scaffold_232_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21697..22854)
DNA (1158bp) protein (386aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] id=24657407 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000255|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000255|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000255|HAMAP-Rule:
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
qs_3_scaffold_232_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22942..24477)
DNA (1536bp) protein (512aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S532_SALRD
murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
qs_3_scaffold_232_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24482..26425)
DNA (1944bp) protein (648aa)
penicillin-binding protein 3; K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] id=24657405 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
penicillin-binding protein 3
Penicillin-binding protein 3 {ECO:0000313|EMBL:ABC44469.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_3_scaffold_232_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26493..27005)
DNA (513bp) protein (171aa)
hypothetical protein
hypothetical protein id=24657404 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC43676.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_232_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27152..28021)
DNA (870bp) protein (290aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6A5_SALRM
mraW; S-adenosyl-methyltransferase mraW
qs_3_scaffold_232_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28087..28608)
DNA (522bp) protein (174aa)
Protein MraZ n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6A4_SALRM
mraZ; protein MraZ rbh
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
qs_3_scaffold_232_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28829..29566
DNA (738bp) protein (246aa)
LexA repressor {ECO:0000313|EMBL:CBH23558.1}; EC=3.4.21.88 {ECO:0000313|EMBL:CBH23558.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salin
LexA repressor n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6A3_SALRM
lexA; LexA repressor
qs_3_scaffold_232_27

Not on your lists

29690..30052
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PHV4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH76042.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
qs_3_scaffold_232_28
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30065..30385
DNA (321bp) protein (107aa)
Putative DNA-binding protein n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5Z2T3_NOCFA
DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:BAD55258.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;
qs_3_scaffold_232_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30455..32269)
DNA (1815bp) protein (605aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
CTP synthase n=2 Tax=Salinibacter ruber RepID=D5H6A2_SALRM
pyrG; CTP synthase
qs_3_scaffold_232_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32301..32759)
DNA (459bp) protein (153aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000313|EMBL:CBH23556.1}; EC=1.1.1.205 {ECO:0000313|EMBL:CBH23556.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6A1_SALRM
Inosine-5'-monophosphate dehydrogenase
Displaying items 1-30 of 31 in total

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