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qs_3_scaffold_240

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_240_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2..94)
DNA (93bp) protein (31aa)
degP; periplasmic serine protease DO-like; K01362 [EC:3.4.21.-] id=24659571 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Probable periplasmic serine protease DO-like {ECO:0000313|EMBL:CBH24733.1}; EC=3.4.21.- {ECO:0000313|EMBL:CBH24733.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
degP; periplasmic serine protease DO-like
qs_3_scaffold_240_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(308..1720)
DNA (1413bp) protein (471aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=309807 species="Bacteria; Bacte
Fumarate hydratase class II n=2 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S250_SALRD
fumC; fumarate hydratase
qs_3_scaffold_240_3
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1833..2399)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8K147_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR73644.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
qs_3_scaffold_240_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2682..5579
DNA (2898bp) protein (966aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
RecB; ATP-dependent exoDNAse id=24659767 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RecB; ATP-dependent exoDNAse
qs_3_scaffold_240_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5548..6126
DNA (579bp) protein (193aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
ATP-dependent DNA helicase
RecB; ATP-dependent exoDNAse id=24659767 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_3_scaffold_240_6
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

6337..6933
DNA (597bp) protein (199aa)
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
qs_3_scaffold_240_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7131..7319
DNA (189bp) protein (63aa)
Para-aminobenzoate synthase component I {ECO:0000313|EMBL:CBH24810.1}; EC=2.6.1.85 {ECO:0000313|EMBL:CBH24810.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis
Para-aminobenzoate synthase component I n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9V5_SALRM
pabB; Para-aminobenzoate synthase component I
qs_3_scaffold_240_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7517..9508
DNA (1992bp) protein (664aa)
Acetyl-CoA synthase {ECO:0000313|EMBL:ABC45340.1}; EC=6.2.1.1 {ECO:0000313|EMBL:ABC45340.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sa
acs; acetyl-CoA synthetase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] id=24659643 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
acs; acetyl-CoA synthetase
qs_3_scaffold_240_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9610..11463)
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9V3_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24808.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_240_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11512..13197)
DNA (1686bp) protein (562aa)
DNA polymerase IV (Family X) n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9V2_SALRM
pol4; DNA polymerase IV
DNA polymerase IV (Family X) {ECO:0000313|EMBL:CBH24807.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_3_scaffold_240_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13812..14558
DNA (747bp) protein (249aa)
MotA/TolQ/ExbB proton channel
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB id=24659640 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:CBH24806.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_3_scaffold_240_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14649..14927
DNA (279bp) protein (93aa)
hypothetical protein
hypothetical protein id=24659639 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24805.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_240_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14982..15590
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9U9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24804.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_240_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15656..16117
DNA (462bp) protein (154aa)
hypothetical protein
hypothetical protein id=24659637 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24803.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_240_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16264..17286
DNA (1023bp) protein (341aa)
Isocitrate dehydrogenase, NAD-dependent {ECO:0000313|EMBL:CBH24802.1}; EC=1.1.1.41 {ECO:0000313|EMBL:CBH24802.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis
Isocitrate dehydrogenase, NAD-dependent n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9U7_SALRM
icd; NAD-dependent isocitrate dehydrogenase
qs_3_scaffold_240_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17512..17952
DNA (441bp) protein (147aa)
hypothetical protein
hypothetical protein id=24659635 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24801.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_240_17
unknown

Not on your lists

19426..20166
DNA (741bp) protein (247aa)

This feature has no annotations

qs_3_scaffold_240_18
unknown

Not on your lists

20260..20961
DNA (702bp) protein (234aa)

This feature has no annotations

qs_3_scaffold_240_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21394..22284
DNA (891bp) protein (297aa)
hypothetical protein
hypothetical protein id=24659634 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Integral membrane protein DUF6 {ECO:0000313|EMBL:ABC45741.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qs_3_scaffold_240_20
Pseudoalteromonas undina, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22360..22803)
DNA (444bp) protein (148aa)
MAM protein n=1 Tax=Pseudoalteromonas undina NCIMB 2128 RepID=U1LDB0_9GAMM
MAM protein {ECO:0000313|EMBL:ERG60329.1}; TaxID=1117320 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas
qs_3_scaffold_240_21
unknown

Not on your lists

comp(23328..23471)
DNA (144bp) protein (48aa)

This feature has no annotations

qs_3_scaffold_240_22
unknown

Not on your lists

comp(23527..23943)
DNA (417bp) protein (139aa)

This feature has no annotations

qs_3_scaffold_240_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24184..25257)
DNA (1074bp) protein (358aa)
glycosyl transferase family protein
glycosyl transferase family protein; K07011 id=24659633 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:ABC45193.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sour
qs_3_scaffold_240_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25501..27450
DNA (1950bp) protein (650aa)
ATP-dependent DNA helicase RecQ; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12] id=24659632 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ATP-dependent DNA helicase, RecQ family {ECO:0000313|EMBL:ABC43925.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABC43925.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
ATP-dependent DNA helicase RecQ
qs_3_scaffold_240_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27467..27901)
DNA (435bp) protein (145aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H9U3_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24798.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_240_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27901..29058)
DNA (1158bp) protein (386aa)
hypothetical protein
hypothetical protein id=24659630 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24797.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_240_27
unknown

Not on your lists

comp(29163..29645)
DNA (483bp) protein (161aa)

This feature has no annotations

Displaying 27 items

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