ggKbase home page

qs_3_scaffold_277

Search features with annotation key words

Displaying 17 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_277_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1..753
DNA (753bp) protein (251aa)
GH3 auxin-responsive promoter superfamily {ECO:0000313|EMBL:CBH25084.1}; EC=6.3.2.- {ECO:0000313|EMBL:CBH25084.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedi
GH3 auxin-responsive promoter superfamily n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAM9_SALRM
GH3; GH3 auxin-responsive promoter superfamily
qs_3_scaffold_277_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

981..1820
DNA (840bp) protein (280aa)
rpoD; RNA polymerase sigma-70 factor
rpoD; RNA polymerase sigma-70 factor; K03086 RNA polymerase primary sigma factor id=24657877 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CBH25085.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qs_3_scaffold_277_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2061..2729
DNA (669bp) protein (223aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44028.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein; K09166 hypothetical protein id=24657878 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_3_scaffold_277_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2910..3899)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAN4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25089.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_277_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3962..4837)
DNA (876bp) protein (292aa)
Cell division protein FtsX n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAN5_SALRM
cell division ABC transporter permease FtsX
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_3_scaffold_277_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5046..5912)
DNA (867bp) protein (289aa)
Prephenate dehydratase {ECO:0000313|EMBL:ABC45693.1}; EC=4.2.1.51 {ECO:0000313|EMBL:ABC45693.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
Prephenate dehydratase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S166_SALRD
pheA; prephenate dehydratase
qs_3_scaffold_277_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6124..6561)
DNA (438bp) protein (146aa)
heat shock protein
heat shock protein; K13993 HSP20 family protein id=24657884 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Heat shock protein, family {ECO:0000313|EMBL:ABC45077.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qs_3_scaffold_277_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7269..7919
DNA (651bp) protein (217aa)
phosphoglycerate mutase family protein
phosphoglycerate mutase family protein id=24657886 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:ABC45796.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qs_3_scaffold_277_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8022..8540)
DNA (519bp) protein (173aa)
Nuclease, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RYJ7_SALRD
nuclease, putative
Nuclease, putative {ECO:0000313|EMBL:ABC46393.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (st
qs_3_scaffold_277_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8631..9470)
DNA (840bp) protein (280aa)
hypothetical protein
hypothetical protein id=24657887 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC44795.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_277_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9828..10280)
DNA (453bp) protein (151aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S160_SALRD
dut; deoxyuridine 5`-triphosphate nucleotidohydrolase
qs_3_scaffold_277_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10506..12428)
DNA (1923bp) protein (641aa)
proton/peptide symporter family protein; K03305 proton-dependent oligopeptide transporter, POT family id=24657890 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
proton/peptide symporter family protein
Proton/peptide symporter family protein {ECO:0000313|EMBL:CBH25099.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_3_scaffold_277_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


12853..14742
DNA (1890bp) protein (630aa)
aspS; aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] id=24657891 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Aspartate--tRNA(Asp/Asn) ligase {ECO:0000255|HAMAP-Rule:MF_00044}; EC=6.1.1.23 {ECO:0000255|HAMAP-Rule:MF_00044};; Aspartyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00044}; Short=AspRS {ECO:0000255|
aspS; aspartyl-tRNA synthetase
qs_3_scaffold_277_14
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

15020..15481
DNA (462bp) protein (154aa)
DNA polymerase sigma n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L9N8_9CYAN
UTP:GlnB (protein PII) uridylyltransferase
UTP:GlnB (Protein PII) uridylyltransferase {ECO:0000313|EMBL:AFY82502.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acu
qs_3_scaffold_277_15
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

15478..15873
DNA (396bp) protein (132aa)
hypothetical protein Tax=RBG_13_Planctomycetes_62_9_curated
HEPN domain protein id=4161595 bin=GWF2_Bacteroidetes_41_31 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN
qs_3_scaffold_277_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15921..16373
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S157_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44367.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_277_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16388..16738)
DNA (351bp) protein (117aa)
hypothetical protein
hypothetical protein id=24657893 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25102.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying 17 items

View Taxonomy