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qs_3_scaffold_309

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_309_1
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(65..535)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3EED9
Uncharacterized protein {ECO:0000313|EMBL:EPR42094.1}; Flags: Fragment;; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" s
transposase
qs_3_scaffold_309_2
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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592..828
DNA (237bp) protein (79aa)
Uncharacterized protein {ECO:0000313|EMBL:ADI15818.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain D
qs_3_scaffold_309_3
unknown

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864..995
DNA (132bp) protein (44aa)

This feature has no annotations

qs_3_scaffold_309_4
Thermus sp. NMX2.A1, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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1032..1262
DNA (231bp) protein (77aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
hypothetical protein n=1 Tax=Thermus oshimai RepID=UPI00036914F9
hypothetical protein
qs_3_scaffold_309_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1310..4750)
DNA (3441bp) protein (1147aa)
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] id=24656873 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=309807 species="Bacteria; Ba
mfd; transcription-repair coupling factor
qs_3_scaffold_309_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5361..5627
DNA (267bp) protein (89aa)
biotin synthesis protein
Biotin synthesis protein, putative {ECO:0000313|EMBL:ABC44159.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salini
biotin synthesis protein id=24656874 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_3_scaffold_309_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5733..6038
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4M9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22984.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_309_8
Salinibacter_ruber, Salinibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6183..6521
DNA (339bp) protein (113aa)
hypothetical protein
hypothetical protein id=24656875 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein id=24656875 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_3_scaffold_309_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6875..7813)
DNA (939bp) protein (313aa)
murQ; N-acetylmuramic acid 6-phosphate etherase; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] id=24656877 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
N-acetylmuramic acid 6-phosphate etherase {ECO:0000255|HAMAP-Rule:MF_00068}; Short=MurNAc-6-P etherase {ECO:0000255|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000255|HAMAP-Rule:MF_00068};; N-acetylmura
murQ; N-acetylmuramic acid 6-phosphate etherase
qs_3_scaffold_309_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(7950..9335)
DNA (1386bp) protein (462aa)
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] id=24656865 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
tRNA modification GTPase MnmE {ECO:0000255|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000255|HAMAP-Rule:MF_00379};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
trmE; tRNA modification GTPase TrmE
qs_3_scaffold_309_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9629..11686)
DNA (2058bp) protein (686aa)
Membrane protein insertase YidC n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S6H3_SALRD
inner membrane protein oxaA
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
qs_3_scaffold_309_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11822..12265)
DNA (444bp) protein (148aa)
Ribonuclease P protein component n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4L8_SALRM
hypothetical protein
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
qs_3_scaffold_309_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(12279..12593)
DNA (315bp) protein (105aa)
Ribosomal protein L34 n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S6H5_SALRD
rpmH; hypothetical protein
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qs_3_scaffold_309_trna_1
unknown

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12617..12688
DNA (72bp)
transferRNA
qs_3_scaffold_309_trna_2
unknown

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12792..12865
DNA (74bp)
transferRNA
qs_3_scaffold_309_14
unknown

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comp(12825..13133)
DNA (309bp) protein (103aa)

This feature has no annotations

qs_3_scaffold_309_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13666..16143)
DNA (2478bp) protein (826aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00283}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00283};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00283};
pheT; phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] id=24658755 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
pheT; phenylalanyl-tRNA synthetase subunit beta
Displaying 17 items

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