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qs_3_scaffold_377

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_377_1
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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3..713
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHR5_THEBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADT83149.1}; TaxID=391623 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus barophilus (stra
qs_3_scaffold_377_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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821..1945
DNA (1125bp) protein (375aa)
Mrp protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4C5_SALRD
mrp; mrp protein
Mrp protein {ECO:0000313|EMBL:ABC44679.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain DS
qs_3_scaffold_377_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2078..2383
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H7B4_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23919.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_377_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2534..3157)
DNA (624bp) protein (208aa)
Conserved hypohtetical protein, secreted n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7B3_SALRM
hypothetical protein
Conserved hypohtetical protein, secreted {ECO:0000313|EMBL:CBH23918.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qs_3_scaffold_377_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3369..4652
DNA (1284bp) protein (428aa)
Translation initiation factor eIF-2B alpha subunit n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4C9_SALRD
translation initiation factor eIF-2B alpha subunit
Translation initiation factor eIF-2B alpha subunit {ECO:0000313|EMBL:ABC45786.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;
qs_3_scaffold_377_6
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4676..5101)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BME7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR23485.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mob
hypothetical protein
qs_3_scaffold_377_7
Pelodictyon phaeoclathratiforme, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(5086..5481)
DNA (396bp) protein (132aa)
DNA polymerase beta domain protein region n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SAE6_PELPB
DNA polymerase beta domain-containing protein
DNA polymerase beta domain protein region {ECO:0000313|EMBL:ACF43832.1}; TaxID=324925 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;"
qs_3_scaffold_377_trna_1
unknown

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5730..5800
DNA (71bp)
transferRNA
qs_3_scaffold_377_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5847..6800
DNA (954bp) protein (318aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4D0_SALRD
prs; ribose-phosphate pyrophosphokinase
qs_3_scaffold_377_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7015..7800
DNA (786bp) protein (262aa)
50S ribosomal protein L25 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7A9_SALRM
rplY; 50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=761659 sp
qs_3_scaffold_377_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7939..8505
DNA (567bp) protein (189aa)
peptidyl-tRNA hydrolase; K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] id=24657686 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptidyl-tRNA hydrolase {ECO:0000255|HAMAP-Rule:MF_00083}; Short=PTH {ECO:0000255|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000255|HAMAP-Rule:MF_00083};; TaxID=309807 species="Bacteria; Bacteroidetes;
peptidyl-tRNA hydrolase
qs_3_scaffold_377_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8605..10734)
DNA (2130bp) protein (710aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:
hppA; membrane-bound proton-translocating pyrophosphatase; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] id=24657685 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hppA; membrane-bound proton-translocating pyrophosphatase
qs_3_scaffold_377_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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11180..12985
DNA (1806bp) protein (602aa)
2-oxo acid dehydrogenases acyltransferase (Catalytic domain) protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4D4_SALRD
2-oxo acid dehydrogenase acyltransferase catalytic subunit
2-oxo acid dehydrogenases acyltransferase (Catalytic domain) protein {ECO:0000313|EMBL:ABC43857.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
qs_3_scaffold_377_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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13216..14163
DNA (948bp) protein (316aa)
Tyrosine recombinase xerD n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H797_SALRM
xerD; tyrosine recombinase XerD
Tyrosine recombinase xerD {ECO:0000313|EMBL:CBH23902.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
Displaying 14 items

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