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qs_3_scaffold_473

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_473_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..427
DNA (426bp) protein (142aa)
Retinal pigment epithelial membrane protein n=2 Tax=Salinibacter ruber RepID=D5H4W3_SALRM
15,15' beta carotene dioxygenase
Retinal pigment epithelial membrane protein {ECO:0000313|EMBL:CBH23068.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sourc
qs_3_scaffold_473_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(501..2780)
DNA (2280bp) protein (760aa)
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit {ECO:0000313|EMBL:CBH23588.1}; EC=1.2.4.1 {ECO:0000313|EMBL:CBH23588.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroide
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6D3_SALRM
acoA_pdhA; 2-oxoisovalerate dehydrogenase, E1 component subunits alpha and beta
qs_3_scaffold_473_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3234..4637)
DNA (1404bp) protein (468aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Sensor kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6D2_SALRM
Sensor kinase
qs_3_scaffold_473_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4759..5472)
DNA (714bp) protein (238aa)
Response regulator DrrA n=2 Tax=Salinibacter ruber RepID=D5H6D1_SALRM
drrA; response regulator DrrA
Response regulator DrrA {ECO:0000313|EMBL:ABC46239.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_473_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5651..6814)
DNA (1164bp) protein (388aa)
alr; alanine racemase; K01775 alanine racemase [EC:5.1.1.1] id=24657423 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608};; TaxID=309807 species="Bacteria; Bactero
alr; alanine racemase
qs_3_scaffold_473_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7100..9487
DNA (2388bp) protein (796aa)
dipeptidyl peptidase IV (DPP IV); K01278 dipeptidyl-peptidase 4 [EC:3.4.14.5] id=24657422 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Dipeptidyl peptidase IV (DPP IV) {ECO:0000313|EMBL:ABC44649.1}; EC=3.4.-.- {ECO:0000313|EMBL:ABC44649.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodot
dipeptidyl peptidase IV (DPP IV)
qs_3_scaffold_473_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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9858..11171
DNA (1314bp) protein (438aa)
pyrC; dihydroorotase; K01465 dihydroorotase [EC:3.5.2.3] id=24658141 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=309807 species="Bacteria; Bacteroidetes; Bactero
pyrC; dihydroorotase
qs_3_scaffold_473_8
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11194..11898)
DNA (705bp) protein (235aa)
metallophosphoesterase n=1 Tax=Salisaeta longa RepID=UPI0003B76A5C
metallophosphoesterase Tax=GWA2_Deltaproteobacteria_54_12_curated
metallophosphoesterase
qs_3_scaffold_473_9
unknown

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comp(12163..12384)
DNA (222bp) protein (74aa)

This feature has no annotations

Displaying 9 items

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