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qs_3_scaffold_54

Search features with annotation key words

Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_54_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..534)
DNA (534bp) protein (178aa)
hypothetical protein id=24659145 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:ABC43637.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_3_scaffold_54_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

896..1906
DNA (1011bp) protein (337aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
Glyceraldehyde-3-phosphate dehydrogenase, type I n=2 Tax=Salinibacter ruber RepID=Q2S3A6_SALRD
gap; glyceraldehyde-3-phosphate dehydrogenase, type I
qs_3_scaffold_54_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2003..3196
DNA (1194bp) protein (398aa)
pgk_tpi; Bifunctional PGK/TIM; K00927 phosphoglycerate kinase [EC:2.7.2.3] id=24659143 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=761659 species="Bacteria;
pgk_tpi; Bifunctional PGK/TIM
qs_3_scaffold_54_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3260..4204
DNA (945bp) protein (315aa)
ABC transporter, ATP-binding protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8F1_SALRM
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CBH24306.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qs_3_scaffold_54_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4349..5197
DNA (849bp) protein (283aa)
hypothetical protein
hypothetical protein id=24659140 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24305.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_54_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5450..6343
DNA (894bp) protein (298aa)
amidinotransferase
amidinotransferase id=24659139 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Amidinotransferase superfamily {ECO:0000313|EMBL:ABC46263.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qs_3_scaffold_54_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6525..7238
DNA (714bp) protein (238aa)
N-acetylglucosaminyltransferase {ECO:0000313|EMBL:CBH24303.1}; EC=2.4.1.- {ECO:0000313|EMBL:CBH24303.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
N-acetylglucosaminyltransferase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8E8_SALRM
nodC; N-acetylglucosaminyltransferase
qs_3_scaffold_54_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7342..7758
DNA (417bp) protein (139aa)
blaI; penicillinase repressor
blaI; penicillinase repressor; K07737 putative transcriptional regulator id=24659137 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Penicillinase repressor {ECO:0000313|EMBL:CBH24302.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_54_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7736..9154
DNA (1419bp) protein (473aa)
TonB family protein
TonB family protein id=24659136 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
TonB family C-terminal domain protein {ECO:0000313|EMBL:ABC44054.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
qs_3_scaffold_54_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9210..10928
DNA (1719bp) protein (573aa)
Protein tonB n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8E6_SALRM
tonB; protein tonB
Protein tonB {ECO:0000313|EMBL:CBH24301.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M
qs_3_scaffold_54_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10940..11464)
DNA (525bp) protein (175aa)
hypothetical protein
hypothetical protein id=24659135 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24300.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_54_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11689..12189)
DNA (501bp) protein (167aa)
HNH endonuclease
HNH endonuclease domain-containing protein id=24659134 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
HNH endonuclease {ECO:0000313|EMBL:CBH24297.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (stra
qs_3_scaffold_54_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12490..13680)
DNA (1191bp) protein (397aa)
rluD; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=24659133 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028, ECO:0000313|EMBL:CBH24296.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II
rluD; ribosomal large subunit pseudouridine synthase D
qs_3_scaffold_54_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13751..14908)
DNA (1158bp) protein (386aa)
Cysteine desulfurase {ECO:0000313|EMBL:CBH24294.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CBH24294.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; S
Cysteine desulfurase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8D9_SALRM
sufS; cysteine desulfurase
qs_3_scaffold_54_15
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

15076..15552
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5674F
Uncharacterized protein {ECO:0000313|EMBL:KER09729.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
hypothetical protein
qs_3_scaffold_54_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15610..16677)
DNA (1068bp) protein (356aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK56_RHOMR
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:AEN72812.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhod
qs_3_scaffold_54_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16726..17889)
DNA (1164bp) protein (388aa)
DNA processing protein DprA n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3B9_SALRD
dprA; DNA processing protein DprA
DNA processing protein DprA {ECO:0000313|EMBL:ABC43675.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_3_scaffold_54_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17886..18908)
DNA (1023bp) protein (341aa)
GTPase Obg n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8D7_SALRM
GTP-binding protein, GTP1/Obg family
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
qs_3_scaffold_54_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19166..19612
DNA (447bp) protein (149aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00
Ribonuclease H n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8D6_SALRM
rnhA; ribonuclease HI
qs_3_scaffold_54_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19735..20034)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8D5_SALRM
hypothetical protein
Uncharacterized protein family UPF0029 {ECO:0000313|EMBL:ABC45902.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qs_3_scaffold_54_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20283..21698
DNA (1416bp) protein (472aa)
Multidrug transporter mdtA n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8D4_SALRM
mdtA; multidrug transporter mdtA
Multidrug transporter mdtA {ECO:0000313|EMBL:CBH24289.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
qs_3_scaffold_54_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21741..24875
DNA (3135bp) protein (1045aa)
acriflavine resistance protein
Acriflavine resistance protein (Cation efflux system) {ECO:0000313|EMBL:ABC45263.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacte
acriflavine resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=24659126 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_3_scaffold_54_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25076..25750
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3C5_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45493.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_3_scaffold_54_trna_2
unknown

Not on your lists

comp(25840..25912)
DNA (73bp)
transferRNA
qs_3_scaffold_54_24
Marinobacter similis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26163..26324
DNA (162bp) protein (54aa)
hypothetical protein id=24659124 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHI28176.1}; TaxID=1420916 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sim
qs_3_scaffold_54_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26423..27874
DNA (1452bp) protein (484aa)
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:CBH24286.1}; EC=4.1.99.3 {ECO:0000313|EMBL:CBH24286.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhod
Deoxyribodipyrimidine photo-lyase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8D1_SALRM
phrB; deoxyribodipyrimidine photo-lyase
qs_3_scaffold_54_26
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

28049..28768
DNA (720bp) protein (240aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0DJ56_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA29394.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
qs_3_scaffold_54_27
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

28809..29726
DNA (918bp) protein (306aa)
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKQ0_SINAD
branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase {ECO:0000313|EMBL:AGA29395.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycet
qs_3_scaffold_54_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29842..30468)
DNA (627bp) protein (209aa)
methyltransferase
methyltransferase id=24659122 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Methyltransferase, putative {ECO:0000313|EMBL:ABC44227.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_3_scaffold_54_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30508..31158)
DNA (651bp) protein (217aa)
lexA2; LexA repressor; K01356 repressor LexA [EC:3.4.21.88] id=24659121 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
LexA repressor {ECO:0000256|RuleBase:RU003992, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.- {ECO:0000256|SAAS:SAAS00273293};; EC=3.4.21.88 {ECO:0000256|RuleBase:RU003992, ECO:0000256|SAAS:SAAS00008054}
lexA2; LexA repressor
Displaying items 1-30 of 42 in total

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