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qs_3_scaffold_1456

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_1456_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..554
DNA (552bp) protein (184aa)
Transcription factor E n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXK8_HALMD
transcription factor TFIIE subunit alpha
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
qs_3_scaffold_1456_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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558..1223
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4V8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52149.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_3_scaffold_1456_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1333..2055
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QYK2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90268.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_3_scaffold_1456_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2714..5323)
DNA (2610bp) protein (870aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25565.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_3_scaffold_1456_trna_1
unknown

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5849..5923
DNA (75bp)
transferRNA
qs_3_scaffold_1456_5

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comp(6185..6382)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V5A590_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS10655.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
qs_3_scaffold_1456_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6383..6871)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DL70_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ34904.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qs_3_scaffold_1456_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7032..7580)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYY0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50821.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_3_scaffold_1456_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7730..9406
DNA (1677bp) protein (559aa)
Acyl-CoA synthetase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CSN0_9EURY
acyl-CoA synthetase
Acyl-CoA synthetase {ECO:0000313|EMBL:ELZ26216.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 1
qs_3_scaffold_1456_9
unknown

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9962..10141
DNA (180bp) protein (60aa)

This feature has no annotations

qs_3_scaffold_1456_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10324..11856
DNA (1533bp) protein (511aa)
Cryptochrome/photolyase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBK6_9EURY
Cryptochrome/photolyase {ECO:0000313|EMBL:EMA54948.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
deoxyribodipyrimidine photolyase-like protein
qs_3_scaffold_1456_11
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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12127..12408
DNA (282bp) protein (94aa)
Diacylglycerol kinase catalytic region n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3T197_NATMM
diacylglycerol kinase catalytic subunit
Diacylglycerol kinase catalytic region {ECO:0000313|EMBL:ADD07356.1}; Diacylglycerol kinase catalytic subunit {ECO:0000313|EMBL:ELY32611.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria;
Displaying 12 items

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