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qs_3_scaffold_226

Search features with annotation key words

Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_226_1
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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785..1306
DNA (522bp) protein (174aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DK10_9EURY
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ELZ35158.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorub
sub; peptidase S8 and S53 subtilisin kexin sedolisin
qs_3_scaffold_226_2
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1355..1825)
DNA (471bp) protein (157aa)
Thioredoxin n=2 Tax=Haloarcula hispanica RepID=G0HZY3_HALHT
thioredoxin
Thioredoxin {ECO:0000313|EMBL:AJF27602.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qs_3_scaffold_226_3
unknown

Not on your lists

1858..2436
DNA (579bp) protein (193aa)

This feature has no annotations

qs_3_scaffold_226_4
unknown

Not on your lists

comp(2587..3048)
DNA (462bp) protein (154aa)

This feature has no annotations

qs_3_scaffold_226_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3258..3593
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LGS2_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA32822.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qs_3_scaffold_226_6
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3744..4001
DNA (258bp) protein (86aa)
hypothetical protein id=24642394 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
Uncharacterized protein {ECO:0000313|EMBL:ERH12343.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
qs_3_scaffold_226_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4105..4377)
DNA (273bp) protein (91aa)
Transcriptional regulator PadR-like family protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2F7Z9_9EURY
transcriptional regulator, PadR family
Transcriptional regulator PadR-like family protein {ECO:0000313|EMBL:ERJ06275.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source=
qs_3_scaffold_226_8
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4858..5004)
DNA (147bp) protein (49aa)
Uncharacterized protein n=2 Tax=Haloferax RepID=M0ITG2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA04729.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 3596
qs_3_scaffold_226_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5135..5944
DNA (810bp) protein (270aa)
Uncharacterized protein n=3 Tax=Halococcus hamelinensis RepID=M0LPP1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA35512.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_3_scaffold_226_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5983..6507)
DNA (525bp) protein (175aa)
ADP-ribose pyrophosphatase, GDP-mannose mannosyl hydrolase (EC:3.6.1.13 3.6.1.-)
Mut/nudix family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZX7_9EURY
Mut/nudix family protein {ECO:0000313|EMBL:EMA50853.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qs_3_scaffold_226_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6504..7397)
DNA (894bp) protein (298aa)
FolD bifunctional protein (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQL3_9EURY
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauciha
qs_3_scaffold_226_12
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7458..8705)
DNA (1248bp) protein (416aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AU38_NATA1
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:ELZ00889.1}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};
qs_3_scaffold_226_13
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8964..11090
DNA (2127bp) protein (709aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JZR4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB37343.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
qs_3_scaffold_226_14
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11295..12098
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CQ55_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24768.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
qs_3_scaffold_226_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12424..14271
DNA (1848bp) protein (616aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2B1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50850.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_3_scaffold_226_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14356..15159)
DNA (804bp) protein (268aa)
Enoyl-CoA hydratase I 5 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZB4_9EURY
Enoyl-CoA hydratase I 5 {ECO:0000313|EMBL:EMA38786.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
enoyl-CoA hydratase/isomerase
qs_3_scaffold_226_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15310..15591)
DNA (282bp) protein (94aa)
ABC transporter n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M025_9EURY
ABC transporter {ECO:0000313|EMBL:EMA38788.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
ABC transporter
qs_3_scaffold_226_18
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15609..16178)
DNA (570bp) protein (190aa)
Branched chain amino acid ABC transporter ATP-binding protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MUG6_HALMO
Branched chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA48090.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
ABC transporter
qs_3_scaffold_226_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16178..16822)
DNA (645bp) protein (215aa)
ABC transporter n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2F2_9EURY
ABC transporter {ECO:0000313|EMBL:EMA38789.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
branched-chain amino acid ABC transporter ATP-binding protein
qs_3_scaffold_226_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16941..18269)
DNA (1329bp) protein (443aa)
Inner-membrane translocator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MTH1_9EURY
Inner-membrane translocator {ECO:0000313|EMBL:EMA48034.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
inner-membrane translocator
qs_3_scaffold_226_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18387..19250)
DNA (864bp) protein (288aa)
Inner-membrane translocator n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEB6_9EURY
Inner-membrane translocator {ECO:0000313|EMBL:EMA55903.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
branched-chain amino acid ABC transporter permease
qs_3_scaffold_226_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19251..19781)
DNA (531bp) protein (177aa)
Extracellular ligand-binding receptor n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LYY7_9EURY
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EMA38792.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ha
branched-chain amino acid ABC transporter periplasmic protein
qs_3_scaffold_226_23
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19843..20124)
DNA (282bp) protein (94aa)
Extracellular ligand-binding receptor n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W6R9_9EURY
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ELY45169.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum su
ABC-type branched-chain amino acid transport system, periplasmic component
qs_3_scaffold_226_24
unknown

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comp(20163..20261)
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 24 items

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