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qs_3_scaffold_359

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_359_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..289
DNA (288bp) protein (96aa)
nrdB_3; ribonucleoside-diphosphate reductase, beta subunit 3 (EC:1.17.4.1)
Probable ribonucleoside-diphosphate reductase beta subunit {ECO:0000313|EMBL:CAI50308.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CAI50308.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Haloba
Probable ribonucleoside-diphosphate reductase beta subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INJ5_NATPD
qs_3_scaffold_359_2
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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843..1586
DNA (744bp) protein (248aa)
pepQ; aminopeptidase (EC:3.4.11.9)
Peptidase M24 n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZIX6_9EURY
Peptidase M24 {ECO:0000313|EMBL:ELY85103.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
qs_3_scaffold_359_3
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1785..2924
DNA (1140bp) protein (380aa)
Acyl-CoA dehydrogenase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NWK4_HALBP
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ADQ69424.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
qs_3_scaffold_359_4
unknown

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comp(2929..3120)
DNA (192bp) protein (64aa)

This feature has no annotations

qs_3_scaffold_359_5
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3287..4273
DNA (987bp) protein (329aa)
haloalkane dehalogenase (EC:3.8.1.5)
Haloalkane dehalogenase {ECO:0000313|EMBL:AGN01003.1}; EC=3.8.1.5 {ECO:0000313|EMBL:AGN01003.1};; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeu
Haloalkane dehalogenase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W7J7_9EURY
qs_3_scaffold_359_6
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4474..4827
DNA (354bp) protein (118aa)
dehydrogenase/reductase 11 (EC:1.1.1.-)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3T059_NATMM
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADD04417.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (
qs_3_scaffold_359_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5147..5272
DNA (126bp) protein (42aa)
dehydrogenase/reductase 11 (EC:1.1.1.-)
Probable oxidoreductase (Short-chain dehydrogenase family) {ECO:0000313|EMBL:CAI49202.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAI49202.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Probable oxidoreductase (Short-chain dehydrogenase family) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRP1_NATPD
qs_3_scaffold_359_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5289..6221)
DNA (933bp) protein (311aa)
Beta-lactamase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZS1_9EURY
Beta-lactamase {ECO:0000313|EMBL:ELZ27389.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.
hypothetical protein
qs_3_scaffold_359_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6218..6544)
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:ELZ27386.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
qs_3_scaffold_359_10

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6585..6938
DNA (354bp) protein (118aa)
Putative alkyl salicylate esterase n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6D7R8_BACAZ
Uncharacterized protein {ECO:0000313|EMBL:KKL19524.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
alpha/beta hydrolase
qs_3_scaffold_359_11
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7076..7927)
DNA (852bp) protein (284aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JB26_HALJB
Enoyl-CoA hydratase {ECO:0000313|EMBL:KDE57395.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
Enoyl-CoA hydratase/isomerase
qs_3_scaffold_359_12
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8328..8552)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SU73_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB36591.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
qs_3_scaffold_359_13
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8569..9423)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0STC0_9EURY
Phenylacetic acid catabolic family protein {ECO:0000313|EMBL:ELZ39112.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum s
phenylacetic acid catabolic family protein
qs_3_scaffold_359_14
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9420..9629)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DUF0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ39111.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
phenylacetic acid degradation PaaB family protein
qs_3_scaffold_359_15
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9626..10045)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0HZW9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG01298.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
qs_3_scaffold_359_16
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10042..10962)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JWA3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB36595.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
qs_3_scaffold_359_17
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11399..11881
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SU69_9EURY
GCN5 family acetyltransferase
GCN5 family acetyltransferase {ECO:0000313|EMBL:KDE57390.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.
qs_3_scaffold_359_18
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11884..12168
DNA (285bp) protein (95aa)
Ferredoxin n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D5B7_9EURY
Ferredoxin {ECO:0000313|EMBL:ELZ29364.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
ferredoxin
qs_3_scaffold_359_19
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12257..13915)
DNA (1659bp) protein (553aa)
AMP-dependent synthetase and ligase n=2 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JB34_HALJB
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELY41417.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalico
qs_3_scaffold_359_20
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14327..15223)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X4H7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY56605.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
qs_3_scaffold_359_21
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15616..16899
DNA (1284bp) protein (428aa)
Branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CVV8_9EURY
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELZ27381.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeome
branched-chain amino acid ABC transporter substrate-binding protein
qs_3_scaffold_359_22
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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17086..17949
DNA (864bp) protein (288aa)
Branched chain amino acid ABC transporter inner membrane protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CVY8_9EURY
Branched chain amino acid ABC transporter inner membrane protein {ECO:0000313|EMBL:ELZ27380.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometri
branched-chain amino acid ABC transporter permease
qs_3_scaffold_359_23
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17946..19052
DNA (1107bp) protein (369aa)
Putative high-affinity branched-chain amino acid ABC transporter permease n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZQ9_9EURY
Putative high-affinity branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ELZ27379.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Hal
branched-chain amino acid ABC transporter permease
qs_3_scaffold_359_24
unknown

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19085..19243
DNA (159bp) protein (53aa)

This feature has no annotations

qs_3_scaffold_359_25
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19278..19970)
DNA (693bp) protein (231aa)
ABC-type branched-chain amino acid transport system, ATPase component n=2 Tax=Haloferax RepID=M0HY90_9EURY
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ELZ88672.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halofera
LivF; ABC-type branched-chain amino acid transport systems, ATPase component
qs_3_scaffold_359_26
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19967..20857)
DNA (891bp) protein (297aa)
ABC transporter n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CY56_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ27377.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848
ABC transporter-like protein
qs_3_scaffold_359_27
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(21041..22270)
DNA (1230bp) protein (410aa)
FAD-binding monooxygenase protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DAU2_9EURY
FAD-binding monooxygenase protein {ECO:0000313|EMBL:ELZ31304.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
hypothetical protein
qs_3_scaffold_359_28
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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22948..24429
DNA (1482bp) protein (494aa)
Aldehyde Dehydrogenase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUG9_9EURY
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EFW92248.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilu
NAD-dependent aldehyde dehydrogenase
qs_3_scaffold_359_29
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24449..25768
DNA (1320bp) protein (440aa)
Phenylacetate-coenzyme A ligase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YXS5_9EURY
Phenylacetate-coenzyme A ligase {ECO:0000313|EMBL:GAD53850.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-
coenzyme F390 synthetase
Displaying 29 items

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