ggKbase home page

qs_3_scaffold_403

Search features with annotation key words

Displaying 27 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_403_1
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

3..251
DNA (249bp) protein (83aa)
Methyltransferase type 11 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH78_THET1
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ACZ43099.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
qs_3_scaffold_403_2
unknown

Not on your lists

329..427
DNA (99bp) protein (33aa)

This feature has no annotations

qs_3_scaffold_403_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

583..741
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N718_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA53727.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qs_3_scaffold_403_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

738..1160
DNA (423bp) protein (141aa)
HSP20 type chaperone n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CE75_9EURY
HSP20 type chaperone {ECO:0000313|EMBL:ELZ20667.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
molecular chaperone
qs_3_scaffold_403_5
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1318..2379)
DNA (1062bp) protein (354aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X273_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ELY55712.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeot
qs_3_scaffold_403_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2393..4060)
DNA (1668bp) protein (556aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ54_9EURY
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EFW93118.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source
hypothetical protein
qs_3_scaffold_403_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4225..5325)
DNA (1101bp) protein (367aa)
Glycosyltransferase-like protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D829_9EURY
Glycosyltransferase-like protein {ECO:0000313|EMBL:ELZ31626.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum p
group 1 glycosyl transferase
qs_3_scaffold_403_8
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5564..6484
DNA (921bp) protein (307aa)
Polysaccharide deacetylase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WI84_9EURY
Polysaccharide deacetylase {ECO:0000313|EMBL:ELY48946.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermo
polysaccharide deacetylase
qs_3_scaffold_403_9
unknown

Not on your lists

6491..6757
DNA (267bp) protein (89aa)

This feature has no annotations

qs_3_scaffold_403_10
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6826..7608
DNA (783bp) protein (261aa)
Lysine exporter (LYSE/YGGA) n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NXL9_9EURY
Lysine exporter (LYSE/YGGA) {ECO:0000313|EMBL:EMA62551.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM
lysine exporter (LYSE/YGGA)
qs_3_scaffold_403_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7696..8457)
DNA (762bp) protein (254aa)
HD family hydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISH7_NATPD
hypothetical protein
HD family hydrolase {ECO:0000313|EMBL:CAI48909.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_3_scaffold_403_12
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8560..9321
DNA (762bp) protein (254aa)
Threonyl/alanyl tRNA synthetase SAD n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DJG8_9EURY
Threonyl/alanyl tRNA synthetase SAD {ECO:0000313|EMBL:ELZ35636.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenqui
Alanyl-tRNA synthetase, class IIc-like protein
qs_3_scaffold_403_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9433..10236
DNA (804bp) protein (268aa)
Acetyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXT4_9EURY
Acetyltransferase {ECO:0000313|EMBL:EMA50123.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;
acetyltransferase
qs_3_scaffold_403_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10421..12040
DNA (1620bp) protein (540aa)
Polysaccharide biosynthesis protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MVH1_9EURY
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EMA49586.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thai
membrane protein involved in the export of O-antigen and teichoic acid
qs_3_scaffold_403_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12387..13115
DNA (729bp) protein (243aa)
Low molecular weight protein-tyrosine-phosphatase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZR4_9EURY
Low molecular weight protein-tyrosine-phosphatase {ECO:0000313|EMBL:EMA38663.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
low molecular weight protein-tyrosine-phosphatase
qs_3_scaffold_403_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13151..14275
DNA (1125bp) protein (375aa)
carboxylate-amine ligase n=1 Tax=Halomicrobium katesii RepID=UPI00037B96CD
ATP-grasp protein-like protein
ATP-grasp protein-like protein {ECO:0000313|EMBL:ACV48129.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muko
qs_3_scaffold_403_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14401..15192)
DNA (792bp) protein (264aa)
FkbM family methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M125_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38070.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
qs_3_scaffold_403_18
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15290..16579)
DNA (1290bp) protein (430aa)
ATP-grasp protein-like protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XBE3_9EURY
ATP-grasp protein-like protein {ECO:0000313|EMBL:ELY58962.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius inn
ATP-grasp protein-like protein
qs_3_scaffold_403_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16613..18031
DNA (1419bp) protein (473aa)
Subtilisin-like serine protease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MC08_9EURY
Subtilisin-like serine protease {ECO:0000313|EMBL:EMA43307.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharo
subtilisin-like serine protease
qs_3_scaffold_403_20
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18157..18861
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W982_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY46020.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
qs_3_scaffold_403_21
unknown

Not on your lists

comp(18825..19244)
DNA (420bp) protein (140aa)

This feature has no annotations

qs_3_scaffold_403_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19938..20762
DNA (825bp) protein (275aa)
Pre-peptidase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBH6_9EURY
Pre-peptidase {ECO:0000313|EMBL:EMA43127.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;
hypothetical protein
qs_3_scaffold_403_23
unknown

Not on your lists

comp(20911..21147)
DNA (237bp) protein (79aa)

This feature has no annotations

qs_3_scaffold_403_24
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21436..23754
DNA (2319bp) protein (773aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NA15_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54716.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_3_scaffold_403_25
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23760..24797
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JTY4_9EURY
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EMA11838.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
qs_3_scaffold_403_26
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24913..25056
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5N4_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15730.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_3_scaffold_403_27
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25062..26351
DNA (1290bp) protein (430aa)
Glycosyl transferase family 2 n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XPK2_9EURY
Glycosyl transferase family 2 {ECO:0000313|EMBL:ELY63457.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 104
glycosyl transferase family protein
Displaying 27 items

View Taxonomy