ggKbase home page

qs_3_scaffold_410

Search features with annotation key words

Displaying 21 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_410_1
unknown

Not on your lists

3..701
DNA (699bp) protein (233aa)

This feature has no annotations

qs_3_scaffold_410_2
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

774..1358
DNA (585bp) protein (195aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=Q5UZT0_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV47223.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qs_3_scaffold_410_3
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1355..2395
DNA (1041bp) protein (347aa)
hom; homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HC13_9EURY
Homoserine dehydrogenase {ECO:0000313|EMBL:ESP87588.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halob
qs_3_scaffold_410_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2533..3777
DNA (1245bp) protein (415aa)
elongation factor 1-alpha (EC:2.7.7.4)
Elongation factor 1-alpha n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5R7_9EURY
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
qs_3_scaffold_410_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


3778..4086
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=2 Tax=Halococcus RepID=M0MVS7_HALMO
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
rps10; 30S ribosomal protein S10
qs_3_scaffold_410_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4252..4650)
DNA (399bp) protein (133aa)
Halocyanin-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5X4_9EURY
Halocyanin-like protein {ECO:0000313|EMBL:EMA39999.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
blue (type 1) copper domain-containing protein
qs_3_scaffold_410_7
unknown

Not on your lists

5100..5678
DNA (579bp) protein (193aa)

This feature has no annotations

qs_3_scaffold_410_trna_1
unknown

Not on your lists

comp(5434..5508)
DNA (75bp)
transferRNA
qs_3_scaffold_410_8
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5636..6919)
DNA (1284bp) protein (428aa)
Membrane protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9Z995_9EURY
membrane protein
Membrane protein {ECO:0000313|EMBL:ELY82949.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
qs_3_scaffold_410_9
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7084..7797)
DNA (714bp) protein (238aa)
thymidylate synthase, flavin-dependent (EC:2.1.1.148)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408}
Thymidylate synthase ThyX n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRU6_HALUD
qs_3_scaffold_410_10
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7967..8539
DNA (573bp) protein (191aa)
hydroxyacylglutathione hydrolase (EC:3.1.2.6)
Beta-lactamase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B483_9EURY
Beta-lactamase {ECO:0000313|EMBL:ELZ04459.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
qs_3_scaffold_410_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8628..8891)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LPX2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA35516.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_3_scaffold_410_12
unknown

Not on your lists

9113..9655
DNA (543bp) protein (181aa)

This feature has no annotations

qs_3_scaffold_410_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9769..10188
DNA (420bp) protein (140aa)
Ubiquitin-like modifier protein SAMP1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMQ7_NATPD
moaD_1; molybdopterin converting factor, small subunit 1
Ubiquitin-like modifier protein SAMP1 {ECO:0000313|EMBL:CAI50601.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
qs_3_scaffold_410_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10148..11299)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM70_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46792.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
N-acetyltransferase GCN5
qs_3_scaffold_410_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11290..12597)
DNA (1308bp) protein (436aa)
Glutamyl-tRNA(Gln) amidotransferase subunit D {ECO:0000256|HAMAP-Rule:MF_00586, ECO:0000256|RuleBase:RU004457}; Short=Glu-ADT subunit D {ECO:0000256|HAMAP-Rule:MF_00586};; EC=6.3.5.- {ECO:0000256|HAMA
glutamyl-tRNA(Gln) amidotransferase, subunit D (EC:6.3.5.7)
Glutamyl-tRNA(Gln) amidotransferase subunit D n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2G9_9EURY
qs_3_scaffold_410_16
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12734..13363
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PDV5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA68236.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
qs_3_scaffold_410_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13457..14137)
DNA (681bp) protein (227aa)
Transcriptional regulator, MarR family n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P323_HALMD
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ACV47495.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrob
qs_3_scaffold_410_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14198..15505)
DNA (1308bp) protein (436aa)
FG-GAP repeat protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWD5_HALMD
FG-GAP repeat-containing protein
FG-GAP repeat protein {ECO:0000313|EMBL:ACV46276.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicr
qs_3_scaffold_410_19
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16442..17797)
DNA (1356bp) protein (452aa)
argK; transport ATPase, component for LAO/AO transport systems / LAO/AO transport system kinase (EC:2.7.-.-)
Transport ATPase, component for LAO/AO transport systems / LAO/AO transport system kinase n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0I4M1_9EURY
Transport ATPase, component for LAO/AO transport systems / LAO/AO transport system kinase {ECO:0000313|EMBL:ELZ91725.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halo
qs_3_scaffold_410_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17794..18210)
DNA (417bp) protein (139aa)
Methylmalonyl-CoA mutase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXY7_9EURY
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:EMA49290.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
methylmalonyl-CoA mutase
Displaying 21 items

View Taxonomy