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qs_3_scaffold_938

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_938_1
unknown

Not on your lists

comp(438..542)
DNA (105bp) protein (35aa)

This feature has no annotations

qs_3_scaffold_938_2
unknown

Not on your lists

comp(708..839)
DNA (132bp) protein (44aa)

This feature has no annotations

qs_3_scaffold_938_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1079..2506
DNA (1428bp) protein (476aa)
Sugar phosphate permease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N455_9EURY
Sugar phosphate permease {ECO:0000313|EMBL:EMA52646.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
putative sugar transporter
qs_3_scaffold_938_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2656..3075)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6B4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41241.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
Protein of unknown function (DUF3054)
qs_3_scaffold_938_5
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3313..4989)
DNA (1677bp) protein (559aa)
Fe-S oxidoreductase n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0I713_9EURY
Fe-S oxidoreductase {ECO:0000313|EMBL:ELZ91797.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;"
Fe-S oxidoreductase
qs_3_scaffold_938_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5668..5916)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M494_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40627.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
ntf2 domain-containing protein
qs_3_scaffold_938_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6235..7416
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PM60_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ05320.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
qs_3_scaffold_938_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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7539..8171
DNA (633bp) protein (211aa)
3-beta hydroxysteroid dehydrogenase/isomerase n=1 Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WVI7_HALHL
3-beta hydroxysteroid dehydrogenase/isomerase
putative NADH-flavin reductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
qs_3_scaffold_938_9
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8302..8703)
DNA (402bp) protein (134aa)
HxlR family transcriptional regulator n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HD90_9EURY
HxlR family transcriptional regulator {ECO:0000313|EMBL:ELZ81039.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans
HxlR family transcriptional regulator
qs_3_scaffold_938_10
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(8785..9441)
DNA (657bp) protein (219aa)
NmrA family protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CS94_TRURR
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:ADI13626.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 1
qs_3_scaffold_938_11
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9983..10186
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IF91_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ94119.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
qs_3_scaffold_938_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10458..11549
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGY5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44982.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_3_scaffold_938_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11625..12593
DNA (969bp) protein (323aa)
apl; AP-endonuclease/AP-lyase (EC:3.1.21.2 4.2.99.18)
AP-endonuclease/AP-lyase/xylose isomerase domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGZ3_9EURY
AP-endonuclease/AP-lyase/xylose isomerase domain-containing protein {ECO:0000313|EMBL:EMA44981.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
qs_3_scaffold_938_14
unknown

Not on your lists

12729..12983
DNA (255bp) protein (85aa)

This feature has no annotations

qs_3_scaffold_938_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13448..13699)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRT3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92702.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_3_scaffold_938_16
Haloterrigena sp. H13, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13750..14010
DNA (261bp) protein (87aa)
Transcriptional regulator AbrB family protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PPT5_9EURY
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:KDD77942.1}; TaxID=1416969 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena s
looped-hinge helix DNA binding domain, AbrB family
qs_3_scaffold_938_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14041..15024)
DNA (984bp) protein (328aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
fen1; DNA repair flap endonuclease Fen1 (EC:3.-.-.-)
Flap endonuclease 1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHD8_9EURY
Displaying 17 items

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