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qs_3_scaffold_1294

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_1294_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..232)
DNA (231bp) protein (77aa)
sod; superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natro
Superoxide dismutase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP41_NATPD
qs_3_scaffold_1294_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(524..1912)
DNA (1389bp) protein (463aa)
phr1; deoxyribodipyrimidine photolyase (EC:4.1.99.3)
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:CCQ37397.1}; EC=4.1.99.3 {ECO:0000313|EMBL:CCQ37397.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
Deoxyribodipyrimidine photolyase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSR6_NATM8
qs_3_scaffold_1294_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2027..2962)
DNA (936bp) protein (312aa)
porB; pyruvate--ferredoxin oxidoreductase, beta subunit (EC:1.2.7.1)
Pyruvate--ferredoxin oxidoreductase beta subunit {ECO:0000313|EMBL:CAI50113.1}; EC=1.2.7.1 {ECO:0000313|EMBL:CAI50113.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
Pyruvate--ferredoxin oxidoreductase beta subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP39_NATPD
qs_3_scaffold_1294_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2965..4857)
DNA (1893bp) protein (631aa)
Pyruvate--ferredoxin oxidoreductase alpha subunit {ECO:0000313|EMBL:CAI50114.1}; EC=1.2.7.1 {ECO:0000313|EMBL:CAI50114.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
porA; pyruvate--ferredoxin oxidoreductase, alpha subunit (EC:1.2.7.1)
Pyruvate--ferredoxin oxidoreductase alpha subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP38_NATPD
qs_3_scaffold_1294_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5666..6304)
DNA (639bp) protein (213aa)
PyrE-like protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTF2_NATM8
pyrE2; homolog to orotate phosphoribosyltransferase
PyrE-like protein {ECO:0000256|HAMAP-Rule:MF_01214}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
qs_3_scaffold_1294_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6291..7364)
DNA (1074bp) protein (358aa)
gdh; glucose 1-dehydrogenase (EC:1.1.1.47)
Glucose 1-dehydrogenase {ECO:0000313|EMBL:CCQ35599.1}; EC=1.1.1.47 {ECO:0000313|EMBL:CCQ35599.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
Glucose 1-dehydrogenase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNQ5_NATM8
qs_3_scaffold_1294_7
uncultured haloarchaeon FLAS10H9, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7419..8699
DNA (1281bp) protein (427aa)
Putative uncharacterized protein FLAS10H9.23 n=1 Tax=uncultured haloarchaeon FLAS10H9 RepID=A7U0V1_9EURY
Putative uncharacterized protein FLAS10H9.23 {ECO:0000313|EMBL:ABT17382.1}; TaxID=447098 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; environmental samples.;" sour
haloacid dehalogenase type 3
qs_3_scaffold_1294_8
unknown

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comp(9018..9338)
DNA (321bp) protein (107aa)

This feature has no annotations

qs_3_scaffold_1294_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9429..10343
DNA (915bp) protein (305aa)
kdgA; 2-dehydro-3-deoxy-(phospho)gluconate aldolase,archaeal-type (EC:4.1.2.14) id=24645199 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Dihydrodipicolinate synthase {ECO:0000313|EMBL:ERH09419.1}; EC=4.3.3.7 {ECO:0000313|EMBL:ERH09419.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophili
kdgA; 2-dehydro-3-deoxy-(phospho)gluconate aldolase,archaeal-type (EC:4.1.2.14)
qs_3_scaffold_1294_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10340..11878
DNA (1539bp) protein (513aa)
Alpha amylase catalytic region n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXD8_HALMD
alpha amylase
Alpha amylase catalytic region {ECO:0000313|EMBL:ACV48372.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muko
qs_3_scaffold_1294_11
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11862..13535
DNA (1674bp) protein (558aa)
amy3; alpha-glucosidase (EC:3.2.1.20)
Alpha-glucosidase {ECO:0000313|EMBL:AFK18760.1}; EC=3.2.1.20 {ECO:0000313|EMBL:AFK18760.1};; Oligo-1,6-glucosidase {ECO:0000313|EMBL:AHZ21871.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobact
Alpha-glucosidase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R3F0_HALMT
qs_3_scaffold_1294_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13595..14809
DNA (1215bp) protein (405aa)
gnaD; D-gluconate dehydratase (EC:4.2.1.39)
D-gluconate dehydratase {ECO:0000313|EMBL:CCQ35595.1}; EC=4.2.1.39 {ECO:0000313|EMBL:CCQ35595.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natron
D-gluconate dehydratase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKB5_NATM8
Displaying 12 items

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