ggKbase home page

qs_3_scaffold_143

Search features with annotation key words

Displaying items 1-30 of 37 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_143_1
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..634)
DNA (633bp) protein (211aa)
IS1341-type transposase (TCE32) n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DXF7_9EURY
IS1341-type transposase (TCE32) {ECO:0000313|EMBL:ELZ39407.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichen
IS1341-type transposase
qs_3_scaffold_143_2
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

719..949
DNA (231bp) protein (77aa)
Transcriptional regulator of a riboflavin/FAD biosynthetic operon n=2 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=U3GM85_NATP1
transcriptional regulator of a riboflavin/FAD biosynthetic operon
Transcriptional regulator of a riboflavin/FAD biosynthetic operon {ECO:0000313|EMBL:AGB30194.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" s
qs_3_scaffold_143_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1046..1381)
DNA (336bp) protein (112aa)
Mechanosensitive channel protein MscS n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INW3_NATPD
msc_6; mechanosensitive channel
Mechanosensitive channel protein MscS {ECO:0000313|EMBL:CAI50189.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
qs_3_scaffold_143_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1775..2584)
DNA (810bp) protein (270aa)
DisA-N domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INW4_NATPD
hypothetical protein
DisA-N domain protein {ECO:0000313|EMBL:CAI50188.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
qs_3_scaffold_143_5
unknown

Not on your lists

comp(2600..2854)
DNA (255bp) protein (85aa)

This feature has no annotations

qs_3_scaffold_143_6
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3200..4360
DNA (1161bp) protein (387aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:ELZ45658.1};; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacter
trpB2; probable tryptophan synthase beta subunit (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EF17_9EURY
qs_3_scaffold_143_7
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4434..4991)
DNA (558bp) protein (186aa)
Acetyltransferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JFB1_HALVA
Acetyltransferase {ECO:0000313|EMBL:EMA06694.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715
hat6; acetyltransferase
qs_3_scaffold_143_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6333..6842)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CUW2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26423.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
mosc domain-containing protein
qs_3_scaffold_143_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6913..7221
DNA (309bp) protein (103aa)
Cyclin domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPK1_NATPD
tfbA_4; transcription initiation factor TFB 4
Cyclin domain protein {ECO:0000313|EMBL:CAI49950.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
qs_3_scaffold_143_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7222..7443)
DNA (222bp) protein (74aa)
phosphopantetheine adenylyltransferase (EC:2.7.7.3)
ppaT; phosphopantetheine adenylyltransferase (EC:2.7.7.3); K02201 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] id=24630162 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Phosphopantetheine adenylyltransferase {ECO:0000313|EMBL:EMA45203.1}; EC=2.7.7.3 {ECO:0000313|EMBL:EMA45203.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
qs_3_scaffold_143_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7690..8199)
DNA (510bp) protein (170aa)
TrmB family transcription regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQQ5_NATM8
TrmB family transcription regulator
TrmB family transcription regulator {ECO:0000313|EMBL:CCQ36438.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas m
qs_3_scaffold_143_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8448..9530)
DNA (1083bp) protein (361aa)
Glutamate--cysteine ligase {ECO:0000255|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000255|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase {ECO:0000255|HAMAP-Rule:MF_01609}; Short=GCS {ECO:0000255
Carboxylate-amine ligase NP_3372A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=CAAL_NATPD
carboxylate-amine ligase
qs_3_scaffold_143_13
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(9589..10215)
DNA (627bp) protein (209aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00351}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00351};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PH63_9EURY
fibrillarin
qs_3_scaffold_143_14
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(10212..11066)
DNA (855bp) protein (285aa)
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LBK8_9EURY
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein {ECO:0000313|EMBL:EMA30947.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobif
rRNA biogenesis protein
qs_3_scaffold_143_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11313..14225)
DNA (2913bp) protein (971aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPB9_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50032.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_3_scaffold_143_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14225..15565)
DNA (1341bp) protein (447aa)
Probable phosphoesterase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPC0_NATPD
hypothetical protein
Probable phosphoesterase {ECO:0000313|EMBL:CAI50031.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (s
qs_3_scaffold_143_17
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(16697..17068)
DNA (372bp) protein (124aa)
Pre-mRNA processing ribonucleoprotein, binding domain protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CDW8_9EURY
Pre-mRNA processing ribonucleoprotein, binding domain protein {ECO:0000313|EMBL:ELZ20064.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;"
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein
qs_3_scaffold_143_18
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17161..18108
DNA (948bp) protein (316aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KNM6_9EURY
metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:AJF26567.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qs_3_scaffold_143_19
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18140..18787
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JGW6_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA07583.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_3_scaffold_143_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18784..19461
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYA2_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48562.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_3_scaffold_143_21
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19540..19956
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JRY7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA11148.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
hypothetical protein
qs_3_scaffold_143_22
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20122..20811
DNA (690bp) protein (230aa)
HhH-GPD family protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVZ7_HALMD
HhH-GPD family protein
HhH-GPD family protein {ECO:0000313|EMBL:ACV48126.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (
qs_3_scaffold_143_23
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20860..21603)
DNA (744bp) protein (248aa)
probable oxidoreductase (short-chain dehydrogenase family) (EC:1.1.1.-)
Dehydrogenase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PHT2_9EURY
Dehydrogenase {ECO:0000313|EMBL:ERH09971.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qs_3_scaffold_143_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21670..23055)
DNA (1386bp) protein (462aa)
phr2; deoxyribodipyrimidine photolyase (EC:4.1.99.3)
Photolyase/cryptochrome n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSU6_9EURY
Photolyase/cryptochrome {ECO:0000313|EMBL:ELZ24939.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qs_3_scaffold_143_25
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23217..23522
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=M0K3M8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA26947.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
qs_3_scaffold_143_26

Not on your lists

comp(23567..24205)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XY55_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS05151.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
qs_3_scaffold_143_27

Not on your lists

comp(24327..25196)
DNA (870bp) protein (290aa)
Rhodanese-related sulfurtransferase n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZR23_9ARCH
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:ESS05150.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sseA2; thiosulfate sulfurtransferase
qs_3_scaffold_143_28
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25455..26246
DNA (792bp) protein (264aa)
tssA2; thiosulfate sulfurtransferase (EC:2.8.1.1)
Thiosulfate sulfurtransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRN2_NATM8
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
qs_3_scaffold_143_29
unknown

Not on your lists

comp(26256..26612)
DNA (357bp) protein (119aa)

This feature has no annotations

qs_3_scaffold_143_30
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26699..26974)
DNA (276bp) protein (92aa)
Amidohydrolase 2 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSK2_9EURY
Amidohydrolase 2 {ECO:0000313|EMBL:EFW92411.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX25
amidohydrolase 2
Displaying items 1-30 of 37 in total

View Taxonomy