ggKbase home page

qs_3_scaffold_213

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_213_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

340..1830
DNA (1491bp) protein (497aa)
menE, acs6; O-succinylbenzoic acid--CoA ligase (EC:6.2.1.26)
O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:CCQ37213.1}; EC=6.2.1.26 {ECO:0000313|EMBL:CCQ37213.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
O-succinylbenzoic acid--CoA ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS91_NATM8
qs_3_scaffold_213_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1865..2614
DNA (750bp) protein (250aa)
NRDE domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSB9_NATM8
NRDE domain protein
NRDE domain protein {ECO:0000313|EMBL:CCQ37212.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
qs_3_scaffold_213_3
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2628..3965)
DNA (1338bp) protein (446aa)
Transposase, IS605 OrfB family protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H1K9_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:ELZ78385.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larseni
transposase, IS605 OrfB family, central region
qs_3_scaffold_213_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4258..4611
DNA (354bp) protein (118aa)
Probable transcription factor (Homolog to RNA polymerase III subunit RPC34) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQX2_NATPD
hypothetical protein
Probable transcription factor (Homolog to RNA polymerase III subunit RPC34) {ECO:0000313|EMBL:CAI49472.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
qs_3_scaffold_213_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4618..5868)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LPB5_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA34943.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qs_3_scaffold_213_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6131..6595)
DNA (465bp) protein (155aa)
fadB_2; enoyl-CoA hydratase II 2 (EC:4.2.1.17)
MaoC family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQX4_NATPD
MaoC domain protein {ECO:0000313|EMBL:CAI49470.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_3_scaffold_213_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6592..8601)
DNA (2010bp) protein (670aa)
hbd_2; 3-hydroxyacyl-CoA dehydrogenase 2/enoyl-CoA hydratase I 2 (EC:1.1.1.35 4.2.1.17)
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase {ECO:0000313|EMBL:CAI49468.1}; EC=1.1.1.35 {ECO:0000313|EMBL:CAI49468.1};; EC=4.2.1.17 {ECO:0000313|EMBL:CAI49468.1};; TaxID=348780 species="Archa
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQX6_NATPD
qs_3_scaffold_213_8
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9362..10195
DNA (834bp) protein (278aa)
rfbB3; dTDP-glucose-46-dehydratase (EC:4.2.1.46)
NADH-binding protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SQ30_9EURY
dTDP-glucose-46-dehydratase {ECO:0000313|EMBL:ELZ44236.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 102
qs_3_scaffold_213_9
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10192..10605)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SQT2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA00591.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_3_scaffold_213_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10778..11389)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1X9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28868.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_3_scaffold_213_11
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11484..11657
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=B0R6Q4_HALS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAG20127.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
qs_3_scaffold_213_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11751..12548)
DNA (798bp) protein (266aa)
ABC-2 type transporter n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1P0_HALMD
ABC transporter
ABC-2 type transporter {ECO:0000313|EMBL:ACV49130.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (
qs_3_scaffold_213_13
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12545..13663)
DNA (1119bp) protein (373aa)
ABC transporter-related protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VU42_9EURY
ABC transporter-related protein {ECO:0000313|EMBL:ELY39793.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetens
ABC-type transport system ATP-binding protein
qs_3_scaffold_213_14
unknown

Not on your lists

13870..14685
DNA (816bp) protein (272aa)

This feature has no annotations

qs_3_scaffold_213_15
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15511..16020
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RQ09_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB60268.1}; Flags: Precursor;; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigen
qs_3_scaffold_213_16
unknown

Not on your lists

comp(16047..16700)
DNA (654bp) protein (218aa)

This feature has no annotations

qs_3_scaffold_213_17
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16845..18083)
DNA (1239bp) protein (413aa)
ATP-grasp protein-like protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X0K4_9EURY
ATP-grasp protein-like protein {ECO:0000313|EMBL:ELY54971.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyti
ATP-grasp protein-like protein
qs_3_scaffold_213_18
unknown

Not on your lists

comp(18390..18938)
DNA (549bp) protein (183aa)

This feature has no annotations

qs_3_scaffold_213_19
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19183..20286)
DNA (1104bp) protein (368aa)
Uncharacterized protein id=24652910 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
Uncharacterized protein {ECO:0000313|EMBL:ERH13430.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
nucleoside-diphosphate-sugar pyrophosphorylase family protein
qs_3_scaffold_213_trna_4
unknown

Not on your lists

comp(20780..20854)
DNA (75bp)
transferRNA
qs_3_scaffold_213_20
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21729..22433)
DNA (705bp) protein (235aa)
proteasome endopeptidase complex subunit beta (EC:3.4.25.1)
Proteasome subunit beta 2 {ECO:0000255|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000255|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit 2 {ECO:0000255|HAMAP-Rule:MF_02113}; Proteasome core protein Ps
Proteasome subunit beta 2 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=PSB2_HALTV
qs_3_scaffold_213_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22426..23160)
DNA (735bp) protein (245aa)
proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVQ5_HALMD
qs_3_scaffold_213_22
unknown

Not on your lists

23368..23529
DNA (162bp) protein (54aa)

This feature has no annotations

qs_3_scaffold_213_23
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23558..25441)
DNA (1884bp) protein (628aa)
coxA; cox-type terminal oxidase subunit I (EC:1.9.3.-)
Cox-type terminal oxidase subunit I {ECO:0000313|EMBL:CCQ37560.1}; EC=1.9.3.- {ECO:0000313|EMBL:CCQ37560.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriac
Cox-type terminal oxidase subunit I n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y4W1_NATM8
qs_3_scaffold_213_24
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25527..25850)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XT53_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37561.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_3_scaffold_213_25
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25888..26301)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XT36_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37562.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_3_scaffold_213_26
unknown

Not on your lists

26689..27210
DNA (522bp) protein (174aa)

This feature has no annotations

qs_3_scaffold_213_27
unknown

Not on your lists

27207..28061
DNA (855bp) protein (285aa)

This feature has no annotations

qs_3_scaffold_213_28
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28080..29384)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XR95_NATM8
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CCQ36751.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
qs_3_scaffold_213_29
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29466..32522)
DNA (3057bp) protein (1019aa)
dld_2; D-lactate dehydrogenase / iron-sulfur protein ( glycolate oxidase iron-sulfur subunit) (EC:1.1.1.28)
FAD-dependent oxidoreductase (GlcD/DLD_GlcF/GlpC domain fusion protein) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISR8_NATPD
FAD-dependent oxidoreductase (GlcD/DLD_GlcF/GlpC domain fusion protein) {ECO:0000313|EMBL:CAI48817.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Displaying items 1-30 of 89 in total

View Taxonomy