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qs_3_scaffold_251

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_251_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..348)
DNA (348bp) protein (116aa)
adh; alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase {ECO:0000313|EMBL:CAI48721.1}; EC=1.1.1.1 {ECO:0000313|EMBL:CAI48721.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomo
Oxidoreductase (Homolog to zinc-containing alcohol dehydrogenase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT13_NATPD
qs_3_scaffold_251_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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607..900
DNA (294bp) protein (98aa)
Translation initiation factor 1A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=IF1A_NATPD
tif1A_1; translation initiation factor IF-1A
Translation initiation factor 1A {ECO:0000255|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000255|HAMAP-Rule:MF_00216};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
qs_3_scaffold_251_3
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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942..1868
DNA (927bp) protein (309aa)
Non-specific serine/threonine protein kinase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KF28_HALAR
Non-specific serine/threonine protein kinase {ECO:0000313|EMBL:EMA15177.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarc
serine/threonine kinase
qs_3_scaffold_251_4
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1878..2666)
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5V4G2_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV45590.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qs_3_scaffold_251_5
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3018..3296
DNA (279bp) protein (93aa)
Transcriptional regulator, ArsR family n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NR52_HALUD
transcriptional regulator, ArsR family
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACV12965.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus
qs_3_scaffold_251_6
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3354..3635
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IFR3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG04567.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
qs_3_scaffold_251_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4191..4577)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITE3_NATPD
hypothetical protein
DUF2237 family protein {ECO:0000313|EMBL:CAI48591.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
qs_3_scaffold_251_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5378..5824
DNA (447bp) protein (149aa)
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
Delta-aminolevulinic acid dehydratase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITI2_NATPD
qs_3_scaffold_251_9
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5803..6291
DNA (489bp) protein (163aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515, ECO:0000313|EMBL:EMA34679.1}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515, ECO:0000313|EMBL:EMA34679.1};; TaxID=358396 species="Arc
porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LQF4_9EURY
qs_3_scaffold_251_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6608..8350
DNA (1743bp) protein (581aa)
Transport protein (Probable substrate ammonium) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLN4_NATM8
amtB1; transport protein (probable substrate ammonium)
Transport protein (Probable substrate ammonium) {ECO:0000313|EMBL:CCQ38029.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Na
qs_3_scaffold_251_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8407..9810)
DNA (1404bp) protein (468aa)
IS1341-type transposase ISNph17 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IM00_NATPD
IS1341-type transposase
IS1341-type transposase ISNph17 {ECO:0000313|EMBL:CAI50869.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phara
qs_3_scaffold_251_12
unknown

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comp(9969..10094)
DNA (126bp) protein (42aa)

This feature has no annotations

qs_3_scaffold_251_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10091..11611)
DNA (1521bp) protein (507aa)
Sodium/solute symporter n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKJ8_NATM8
sodium/solute symporter
SSSF family transport protein {ECO:0000313|EMBL:CCQ36026.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
qs_3_scaffold_251_14
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11608..12345)
DNA (738bp) protein (246aa)
Transcriptional regulator n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L612_9EURY
Transcriptional regulator {ECO:0000313|EMBL:EMA28533.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
tenA-2; transcriptional regulator
qs_3_scaffold_251_15
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12342..12860)
DNA (519bp) protein (173aa)
TenA family transcriptional regulator n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B165_9EURY
TenA family transcriptional regulator {ECO:0000313|EMBL:ELZ04297.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia D
TenA family transcriptional regulator
qs_3_scaffold_251_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13020..14360
DNA (1341bp) protein (447aa)
hemL; glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000255|HAMAP-Rule:MF_00375}; Short=GSA {ECO:0000255|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000255|HAMAP-Rule:MF_00375};; Glutamate-1-semialdehyde aminot
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=GSA_NATPD
qs_3_scaffold_251_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14486..14740)
DNA (255bp) protein (85aa)
Glutaredoxin n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT18_NATPD
glx_1; glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:CAI48716.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain ATCC 3
qs_3_scaffold_251_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14915..16312)
DNA (1398bp) protein (466aa)
AryLSUlfotransferase (Asst) n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8I7_9EURY
AryLSUlfotransferase (Asst) {ECO:0000313|EMBL:EMA54181.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensi
hypothetical protein
qs_3_scaffold_251_19
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(16474..17955)
DNA (1482bp) protein (494aa)
Permease n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AKE7_NATGS
permease
Permease {ECO:0000313|EMBL:AFZ73622.1}; Xanthine/uracil/vitamin C permease {ECO:0000313|EMBL:ELY67905.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natro
qs_3_scaffold_251_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18044..18763)
DNA (720bp) protein (240aa)
apt_2; adenine phosphoribosyltransferase (EC:2.4.2.7)
Purine phosphoribosyltransferase (Adenine phosphoribosyltransferase, xanthine-guanine phosphoribosyltransferase) {ECO:0000313|EMBL:CAI48718.1}; EC=2.4.2.- {ECO:0000313|EMBL:CAI48718.1};; TaxID=348780
Purine phosphoribosyltransferase (Adenine phosphoribosyltransferase, xanthine-guanine phosphoribosyltransferase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT16_NATPD
qs_3_scaffold_251_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18842..19369)
DNA (528bp) protein (176aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000255|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000255|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000255|HAMAP-Rul
Orotate phosphoribosyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PYRE_NATPD
qs_3_scaffold_251_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19415..20548)
DNA (1134bp) protein (378aa)
citZ; citrate (si)-synthase (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomo
Citrate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISY7_NATPD
qs_3_scaffold_251_23
unknown

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comp(20582..21472)
DNA (891bp) protein (297aa)

This feature has no annotations

qs_3_scaffold_251_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21578..22534
DNA (957bp) protein (319aa)
AstE family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISY6_NATPD
hypothetical protein rbh
AstE family protein {ECO:0000313|EMBL:CAI48749.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_3_scaffold_251_25
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22814..23710
DNA (897bp) protein (299aa)
l-threonine synthase (EC:4.2.3.1)
L-threonine synthase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D2Z0_9EURY
L-threonine synthase {ECO:0000313|EMBL:ELZ29825.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM
qs_3_scaffold_251_26
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23730..24998)
DNA (1269bp) protein (423aa)
tiaS; tRNAIle2(CAT)--2-agmatinylcytidine synthetase (EC:6.3.4.-)
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS {ECO:0000256|HAMAP-Rule:MF_01892}; Short=tRNA(Ile2)-agm2C synthetase {ECO:0000256|HAMAP-Rule:MF_01892};; EC=6.3.4.22 {ECO:0000256|HAMAP-Rule:MF_01892};;
tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSQ7_NATM8
qs_3_scaffold_251_27
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25121..26116
DNA (996bp) protein (332aa)
Putative HTH-type transcriptional regulatory protein Nmlp_3254 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSM7_NATM8
cro/C1 family transcription regulator
Putative HTH-type transcriptional regulatory protein Nmlp_3254 {ECO:0000256|HAMAP-Rule:MF_00584}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
qs_3_scaffold_251_28
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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26454..26771
DNA (318bp) protein (106aa)
Putative nickel-responsive regulator n=1 Tax=Halonotius sp. J07HN6 RepID=U1Q287_9EURY
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp.
CopG family transcripitonal regulator
qs_3_scaffold_251_29
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27037..27639
DNA (603bp) protein (201aa)
Cobalt ABC transporter permease n=3 Tax=Haloferax RepID=M0FHT3_9EURY
Cobalt ABC transporter permease {ECO:0000313|EMBL:KDE59406.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A5
cbiM; ABC-type transport system permease protein (probable substrate cobalt/nickel/biotin)
qs_3_scaffold_251_30
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27639..27962
DNA (324bp) protein (108aa)
ABC-type transport system small membrane protein (Probable substrate cobalt/nickel/biotin) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y2Q0_NATM8
ABC-type transport system small membrane protein (probable substrate cobalt/nickel/biotin)
ABC-type transport system small membrane protein (Probable substrate cobalt/nickel/biotin) {ECO:0000313|EMBL:CCQ36793.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
Displaying items 1-30 of 57 in total

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