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qs_3_scaffold_397

Search features with annotation key words

Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_397_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..521)
DNA (519bp) protein (173aa)
sucD; succinate--CoA ligase (ADP-forming) alpha subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y4I9_NATM8
qs_3_scaffold_397_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(518..1660)
DNA (1143bp) protein (381aa)
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000255|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000255|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000255|HAMAP-Rule:MF_00558};
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SUCC_NATPD
qs_3_scaffold_397_3
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2074..3627
DNA (1554bp) protein (518aa)
Putative PAS/PAC sensor protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NSH4_HALUD
Uncharacterized protein {ECO:0000313|EMBL:KDE59590.1}; Flags: Fragment;; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnic
hypothetical protein
qs_3_scaffold_397_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3859..4521)
DNA (663bp) protein (221aa)
ugpQ; glycerophosphodiester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:CAI50271.1}; EC=3.1.4.46 {ECO:0000313|EMBL:CAI50271.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
Glycerophosphodiester phosphodiesterase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INN1_NATPD
qs_3_scaffold_397_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4885..6183
DNA (1299bp) protein (433aa)
Transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKB0_9EURY
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;
sodium-dependent transporter
qs_3_scaffold_397_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6878..8347
DNA (1470bp) protein (490aa)
accB_2; acyl-CoA carboxylase 2, carboxyltransferase component (beta subunit) (EC:6.4.1.-)
Propionyl-CoA carboxylase carboxyltransferase component {ECO:0000313|EMBL:CAI50273.1}; EC=6.4.1.3 {ECO:0000313|EMBL:CAI50273.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacter
Propionyl-CoA carboxylase carboxyltransferase component n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INM9_NATPD
qs_3_scaffold_397_7
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8350..8589
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAQ7_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ14779.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_3_scaffold_397_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8593..10398)
DNA (1806bp) protein (602aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P166_HALMD
PAS/PAC sensor signal transduction histidine kinase
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:ACV49081.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" sourc
qs_3_scaffold_397_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10522..11772)
DNA (1251bp) protein (417aa)
IS1341-type transposase ISNph12 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ11_NATPD
IS1341-type transposase
IS1341-type transposase ISNph12 {ECO:0000313|EMBL:CAI49787.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phara
qs_3_scaffold_397_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11949..13796
DNA (1848bp) protein (616aa)
accA_2; biotin carboxylase 1, acyl-CoA carboxylase, alpha subunit 2 (EC:6.3.4.14)
Propionyl-CoA carboxylase biotin carboxylase component {ECO:0000313|EMBL:CAI50275.1}; EC=6.4.1.3 {ECO:0000313|EMBL:CAI50275.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteri
Propionyl-CoA carboxylase biotin carboxylase component n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INM7_NATPD
qs_3_scaffold_397_11
unknown

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13840..14031
DNA (192bp) protein (64aa)

This feature has no annotations

qs_3_scaffold_397_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14575..16005
DNA (1431bp) protein (477aa)
Sensor box histidine kinase {ECO:0000313|EMBL:CAI49769.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CAI49769.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Sensor box histidine kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ29_NATPD
signal-transducing histidine kinase
qs_3_scaffold_397_13
unknown

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comp(16089..16226)
DNA (138bp) protein (46aa)

This feature has no annotations

qs_3_scaffold_397_14
unknown

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comp(16459..16911)
DNA (453bp) protein (151aa)

This feature has no annotations

qs_3_scaffold_397_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17600..18130)
DNA (531bp) protein (177aa)
GNAT family acetyltransferase {ECO:0000313|EMBL:CAI50155.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAI50155.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
GNAT family acetyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INZ7_NATPD
protein N-acetyltransferase-like protein
qs_3_scaffold_397_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18134..19318)
DNA (1185bp) protein (395aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000255|HAMAP-Rule:MF_00145}; EC=2.7.2.3 {ECO:0000255|HAMAP-Rule:MF_00145};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Phosphoglycerate kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PGK_NATPD
qs_3_scaffold_397_17
unknown

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comp(19780..19869)
DNA (90bp) protein (30aa)

This feature has no annotations

qs_3_scaffold_397_18
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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20205..20624
DNA (420bp) protein (140aa)
livH3; putative branched-chain amino acids ABC transporter permease; K01997 branched-chain amino acid transport system permease protein id=24651177 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ERH12751.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophili
amino acid/amide ABC transporter membrane protein 1, haat family
qs_3_scaffold_397_19
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20621..22165
DNA (1545bp) protein (515aa)
ABC-type branched-chain amino acid transport system, permease protein II n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R8C7_HALMT
livM; ABC-type branched-chain amino acid transport system, permease protein II
ABC-type branched-chain amino acid transport system, permease protein II {ECO:0000313|EMBL:AFK20487.1}; Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:AHZ23848.1}; TaxID=523841 s
qs_3_scaffold_397_20

Not on your lists

22317..22814
DNA (498bp) protein (166aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family n=1 Tax=uncultured archaeon A07HR67 RepID=V4XZN0_9ARCH
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ESS04097.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein I
qs_3_scaffold_397_21
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22811..23572
DNA (762bp) protein (254aa)
ABC transporter n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0HPA5_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ86425.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JCM 10717.;"
livF3; putative branched-chain amino acids ABC transporter ATP-binding protein
qs_3_scaffold_397_22
uncultured haloarchaeon, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23899..25143)
DNA (1245bp) protein (415aa)
ABC-type branched-chain amino acid transport systems, substrate-binding protein n=1 Tax=uncultured haloarchaeon RepID=A5YSQ8_9EURY
ABC-type branched-chain amino acid transport systems, substrate-binding protein {ECO:0000313|EMBL:ABQ76015.1}; TaxID=160804 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
livJ3; putative branched-chain amino acids ABC transporter periplasmic substrate-binding protein
qs_3_scaffold_397_23
unknown

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comp(25705..26040)
DNA (336bp) protein (112aa)

This feature has no annotations

qs_3_scaffold_397_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(26118..26375)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INY9_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50163.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_3_scaffold_397_25
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26451..27101
DNA (651bp) protein (217aa)
DNA binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N480_9EURY
DNA binding protein {ECO:0000313|EMBL:EMA51914.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
Bacterio-opsin activator HTH domain protein
qs_3_scaffold_397_26
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27176..28231
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C8K2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ18687.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
qs_3_scaffold_397_27
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28316..28600
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DWQ7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK40301.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
qs_3_scaffold_397_28
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28608..29084)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKA7_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35554.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_3_scaffold_397_29
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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29251..30891
DNA (1641bp) protein (547aa)
Type II/IV secretion system ATPase protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQF2_NATPD
ATPase
Type II/IV secretion system ATPase protein {ECO:0000313|EMBL:CAI49644.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natrono
qs_3_scaffold_397_30
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30891..32984
DNA (2094bp) protein (698aa)
Type II/IV secretion system transmembrane protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XZG7_NATM8
type II/IV secretion system transmembrane protein
Type II/IV secretion system transmembrane protein {ECO:0000313|EMBL:CCQ35556.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="
Displaying items 1-30 of 36 in total

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