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qs_3_scaffold_418

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_418_1

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comp(2..3652)
DNA (3651bp) protein (1217aa)
DNA polymerase III, delta subunit n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y1V2_9ARCH
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ESS06606.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
replication factor C small subunit
qs_3_scaffold_418_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3732..4766
DNA (1035bp) protein (345aa)
DUF583 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN39_NATM8
DUF583 family protein
DUF583 family protein {ECO:0000313|EMBL:CCQ35294.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
qs_3_scaffold_418_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4871..5224
DNA (354bp) protein (118aa)
GNAT family acetyltransferase {ECO:0000313|EMBL:CAI48543.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAI48543.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
GNAT family acetyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITJ0_NATPD
protein N-acetyltransferase-like protein
qs_3_scaffold_418_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5221..6591)
DNA (1371bp) protein (457aa)
pmm2; phosphohexomutase (phosphoglucomutase / phosphomannomutase) (EC:5.4.2.-)
Phosphohexomutase (Phosphoglucomutase / phosphomannomutase) {ECO:0000313|EMBL:CCQ37697.1}; EC=5.4.2.- {ECO:0000313|EMBL:CCQ37697.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Haloba
Phosphohexomutase (Phosphoglucomutase / phosphomannomutase) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y568_NATM8
qs_3_scaffold_418_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6688..7686
DNA (999bp) protein (333aa)
Replication factor C small subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITA9_NATPD
rfcC; replication factor C small subunit 2
Replication factor C small subunit {ECO:0000313|EMBL:CAI48625.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas ph
qs_3_scaffold_418_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7687..8061)
DNA (375bp) protein (125aa)
imd1; inosine monophosphate dehydrogenase (EC:1.1.1.205)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SQD7_9EURY
Signal transduction protein with CBS domain protein {ECO:0000313|EMBL:EJN58071.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum sala
qs_3_scaffold_418_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8119..9078)
DNA (960bp) protein (320aa)
trmG10; tRNA (guanine(10),N(2))-dimethyltransferase (EC:2.1.1.213)
tRNA (Guanine(10),N(2))-dimethyltransferase {ECO:0000313|EMBL:CCQ37625.1}; EC=2.1.1.213 {ECO:0000313|EMBL:CCQ37625.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
tRNA (Guanine(10),N(2))-dimethyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLF5_NATM8
qs_3_scaffold_418_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9227..9790
DNA (564bp) protein (188aa)
TATA-box-binding protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=TBP_NATPD
tbpE; transcription factor
TATA-box-binding protein {ECO:0000255|HAMAP-Rule:MF_00408}; Box A-binding protein {ECO:0000255|HAMAP-Rule:MF_00408}; Short=BAP {ECO:0000255|HAMAP-Rule:MF_00408};; TATA sequence-binding protein {ECO:00
qs_3_scaffold_418_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9827..10177
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4W9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29224.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_3_scaffold_418_10
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(10566..11408)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HPG5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ85648.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
qs_3_scaffold_418_11
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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11744..12943
DNA (1200bp) protein (400aa)
Pyrrolo-quinoline quinone n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AEG3_NATGS
WD40-like repeat protein
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ELY66752.1}; WD40-like repeat protein {ECO:0000313|EMBL:AFZ71450.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae
qs_3_scaffold_418_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12976..13335)
DNA (360bp) protein (120aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-R
ATP phosphoribosyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XYX5_NATM8
qs_3_scaffold_418_13
unknown

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13352..13693
DNA (342bp) protein (114aa)

This feature has no annotations

qs_3_scaffold_418_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13819..15117
DNA (1299bp) protein (433aa)
guaD_1; nucleoside deaminase 1 (cytosine deaminase, guanine deaminase ) (EC:3.5.4.3 3.5.4.1)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000255|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000255|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000255|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=MTAD_NATPD
qs_3_scaffold_418_15
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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15248..16213
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XW18_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY65712.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
qs_3_scaffold_418_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16373..17650
DNA (1278bp) protein (426aa)
ahcY; adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP65_NATM8
qs_3_scaffold_418_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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18413..19915
DNA (1503bp) protein (501aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000313|EMBL:CAI48439.1}; EC=6.1.1.20 {ECO:0000313|EMBL:CAI48439.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITU4_NATPD
qs_3_scaffold_418_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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19915..21621
DNA (1707bp) protein (569aa)
pheT; phenylalanine--tRNA ligase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU55_NATM8
Displaying 18 items

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