ggKbase home page

qs_3_scaffold_450

Search features with annotation key words

Displaying 28 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_450_1
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..300
DNA (300bp) protein (100aa)
TRAP transporter solute receptor, TAXI family protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PV20_9EURY
TRAP transporter solute receptor, TAXI family protein {ECO:0000313|EMBL:EMA72700.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="H
TRAP transporter solute receptor, TAXI family
qs_3_scaffold_450_2
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

361..2352
DNA (1992bp) protein (664aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Halorubrum sp. T3 RepID=UPI0003789E95
TRAP transporter 4TM/12TM fusion protein
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:ACM58159.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lac
qs_3_scaffold_450_3
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2387..2926
DNA (540bp) protein (180aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH97557.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum su
qs_3_scaffold_450_4
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2923..3162
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LTI8_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM58160.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
qs_3_scaffold_450_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3183..4661)
DNA (1479bp) protein (493aa)
acetyl-CoA hydrolase/transferase (EC:3.1.2.1) rbh
Succinate CoA transferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D132_9EURY
Succinate CoA transferase {ECO:0000313|EMBL:ELZ28402.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
qs_3_scaffold_450_6
unknown

Not on your lists

comp(4658..4762)
DNA (105bp) protein (35aa)

This feature has no annotations

qs_3_scaffold_450_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4929..5717
DNA (789bp) protein (263aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D0J9_9EURY
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ELZ28403.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pall
enoyl-CoA hydratase/isomerase
qs_3_scaffold_450_8

Not on your lists

comp(5745..6239)
DNA (495bp) protein (165aa)
Acyl-CoA dehydrogenase n=1 Tax=uncultured archaeon A07HR67 RepID=V4X530_9ARCH
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ESS02644.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
acyl-CoA dehydrogenase
qs_3_scaffold_450_9
unknown

Not on your lists

comp(6305..6643)
DNA (339bp) protein (113aa)

This feature has no annotations

qs_3_scaffold_450_10
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6744..7808
DNA (1065bp) protein (355aa)
DMT(Drug/metabolite transporter) superfamily permease n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KZK1_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA05547.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_3_scaffold_450_11
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8271..8564
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WMX0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY49688.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
transposase, IS605 OrfB family, central region
qs_3_scaffold_450_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8591..9529
DNA (939bp) protein (313aa)
IS1341-type transposase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D052_9EURY
IS1341-type transposase {ECO:0000313|EMBL:ELZ27499.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
IS1341-type transposase
qs_3_scaffold_450_13
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9663..10703)
DNA (1041bp) protein (347aa)
Alcohol dehydrogenase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KAG1_9EURY
IMP dehydrogenase
IMP dehydrogenase {ECO:0000313|EMBL:AHB68258.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
qs_3_scaffold_450_14
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10803..12122
DNA (1320bp) protein (440aa)
UPF0272 protein HAH_2101 n=2 Tax=Haloarcula hispanica RepID=G0HW01_HALHT
hypothetical protein
UPF0272 protein HAH_2101 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (s
qs_3_scaffold_450_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


12147..13616
DNA (1470bp) protein (490aa)
DNA repair and recombination protein RadB n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISA2_NATPD
radB; DNA repair and recombination protein RadB
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
qs_3_scaffold_450_16
unknown

Not on your lists

13757..14728
DNA (972bp) protein (324aa)

This feature has no annotations

qs_3_scaffold_450_17
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14753..15052
DNA (300bp) protein (100aa)
Lycopene cyclase domain-containing protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L5D4_9EURY
Lycopene cyclase domain-containing protein {ECO:0000313|EMBL:EMA27200.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma la
lycopene cyclase domain-containing protein
qs_3_scaffold_450_18
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15118..15942
DNA (825bp) protein (275aa)
short-chain dehydrogenase id=24644252 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Dehydrogenase {ECO:0000313|EMBL:ERH08484.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
daunorubicin C-13 ketoreductase
qs_3_scaffold_450_trna_1
unknown

Not on your lists

comp(16133..16207)
DNA (75bp)
transferRNA
qs_3_scaffold_450_19
unknown

Not on your lists

16396..17466
DNA (1071bp) protein (357aa)

This feature has no annotations

qs_3_scaffold_450_20
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17575..18018
DNA (444bp) protein (148aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211};; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Nat
Anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WWS9_9EURY
qs_3_scaffold_450_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17985..18482
DNA (498bp) protein (166aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000255|HAMAP-Rule:MF_00211};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
Anthranilate phosphoribosyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=TRPD_NATPD
qs_3_scaffold_450_22
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18479..19105
DNA (627bp) protein (209aa)
trpF; phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135};; TaxID=268739 species="Arch
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y158_NATM8
qs_3_scaffold_450_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19102..20691
DNA (1590bp) protein (530aa)
trpE_1; anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component 1 {ECO:0000313|EMBL:CAI49762.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CAI49762.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
Anthranilate synthase component I n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ36_NATPD
qs_3_scaffold_450_24
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20688..21518
DNA (831bp) protein (277aa)
trpG_1; anthranilate synthase, component II 1 (EC:4.1.3.27)
Glutamine amidotransferase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C1R3_9EURY
Glutamine amidotransferase {ECO:0000313|EMBL:ELZ17221.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13
qs_3_scaffold_450_25
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21626..22048
DNA (423bp) protein (141aa)
Ribonucleoside-diphosphate reductase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0ANS1_NATGS
ribonucleoside-diphosphate reductase
Ribonucleoside-diphosphate reductase {ECO:0000313|EMBL:ELY73285.1}; Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:AFZ74867.1}; TaxID=797304 species="Archaea; Eury
qs_3_scaffold_450_26
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22048..23397
DNA (1350bp) protein (450aa)
Ribonucleoside-diphosphate reductase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RTR9_HALTV
ribonucleoside-diphosphate reductase
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:ADB61020.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.
qs_3_scaffold_450_27
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23369..24328
DNA (960bp) protein (320aa)
nrdA_2; ribonucleoside-diphosphate reductase, alpha subunit 2 (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase,adenosylcobalamin-dependent {ECO:0000313|EMBL:CAI49764.2}; EC=1.17.4.1 {ECO:0000313|EMBL:CAI49764.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria;
Ribonucleoside-diphosphate reductase n=2 Tax=Natronomonas pharaonis RepID=Q3IQ34_NATPD
Displaying 28 items

View Taxonomy