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qs_3_scaffold_751

Search features with annotation key words

Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_751_1
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3..95
DNA (93bp) protein (31aa)
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; TaxID=12
qs_3_scaffold_751_2
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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704..964
DNA (261bp) protein (87aa)
Translation initiation factor 1A n=3 Tax=Archaea RepID=U1Q9Z9_9EURY
Translation initiation factor 1A {ECO:0000256|HAMAP-Rule:MF_00216}; Short=aIF-1A {ECO:0000256|HAMAP-Rule:MF_00216};; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halofer
tif1A_2; translation initiation factor IF-1A
qs_3_scaffold_751_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1001..2746)
DNA (1746bp) protein (582aa)
glyS; glycine--tRNA ligase (EC:6.1.1.14)
Glycine--tRNA ligase {ECO:0000313|EMBL:CCQ35583.1}; EC=6.1.1.14 {ECO:0000313|EMBL:CCQ35583.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomo
Glycine--tRNA ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNP4_NATM8
qs_3_scaffold_751_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2743..3594)
DNA (852bp) protein (284aa)
CBS domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNR7_NATM8
cbs2; CBS domain protein
CBS domain protein {ECO:0000313|EMBL:CCQ35582.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
qs_3_scaffold_751_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3648..4016)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU05_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48378.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_3_scaffold_751_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4081..4548)
DNA (468bp) protein (156aa)
Cupin 2 barrel domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU06_NATPD
hypothetical protein
Cupin 2 barrel domain protein {ECO:0000313|EMBL:CAI48377.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
qs_3_scaffold_751_7
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4900..5235)
DNA (336bp) protein (112aa)
Thermosome subunit n=1 Tax=Halogranum salarium B-1 RepID=J3JFU1_9EURY
Thermosome subunit {ECO:0000313|EMBL:EJN59549.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ths2; thermosome subunit 2
qs_3_scaffold_751_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5225..6421)
DNA (1197bp) protein (399aa)
Thermosome subunit 2 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU07_NATPD
ths_2; thermosome subunit 2 (beta subunit)
Thermosome subunit 2 {ECO:0000313|EMBL:CAI48376.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strai
qs_3_scaffold_751_9
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7089..7898)
DNA (810bp) protein (270aa)
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=Halonotius sp. J07HN6 RepID=U1NE98_9EURY
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:ERH01630.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halono
potC2; spermidine/putrescine ABC transporter permease
qs_3_scaffold_751_10
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7895..8767)
DNA (873bp) protein (291aa)
ABC-type spermidine/putrescine transport system, permease component I n=2 Tax=Halonotius RepID=U1NVB0_9EURY
ABC-type spermidine/putrescine transport system, permease component I {ECO:0000313|EMBL:ERH01631.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonot
potB; ABC-type transport system permease protein (probable substrate spermidine/putrescine)
qs_3_scaffold_751_11
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8754..9887)
DNA (1134bp) protein (378aa)
Spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0L0M6_9EURY
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA14401.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" so
potA; ABC-type spermidine/putrescine transport system,ATP-binding protein
qs_3_scaffold_751_12
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9890..10849)
DNA (960bp) protein (320aa)
Spermidine/putrescine ABC transporter spermidine/putrescine binding protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JZ27_9EURY
potD2; spermidine/putrescine ABC transporter spermidine/putrescine binding protein
Spermidine/putrescine ABC transporter spermidine/putrescine binding protein {ECO:0000313|EMBL:EMA14402.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
qs_3_scaffold_751_13
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11630..12982
DNA (1353bp) protein (451aa)
carboxypeptidase Taq (EC:3.4.17.19)
Carboxypeptidase Taq n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K8A9_9EURY
Carboxypeptidase Taq {ECO:0000313|EMBL:EMA17033.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 135
qs_3_scaffold_751_trna_1
unknown

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comp(13185..13268)
DNA (84bp)
transferRNA
qs_3_scaffold_751_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13325..13579)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU08_NATPD
psp operon protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48375.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_3_scaffold_751_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13576..13983)
DNA (408bp) protein (136aa)
YjgF family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU09_NATPD
psp1; ribonuclease, PSP-type
Enamine/imine deaminase {ECO:0000313|EMBL:CAI48374.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_3_scaffold_751_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13953..16154)
DNA (2202bp) protein (734aa)
DEAD/DEAH box helicase (EC:3.6.4.-)
DEAD/DEAH box helicase {ECO:0000313|EMBL:CCQ35243.1}; EC=3.6.4.- {ECO:0000313|EMBL:CCQ35243.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronom
DEAD/DEAH box helicase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XYP5_NATM8
qs_3_scaffold_751_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16288..16899
DNA (612bp) protein (204aa)
cobC; probable adenosylcobalamin 5'-phosphate phosphatase / alpha-ribazole 5'-phosphate phosphatase (EC:3.1.3.73)
CobC/GpmA family phosphatase {ECO:0000313|EMBL:CCQ37889.1}; EC=3.1.3.- {ECO:0000313|EMBL:CCQ37889.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Probable adenosylcobalamin 5'-phosphate phosphatase / alpha-ribazole 5'-phosphate phosphatase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTS0_NATM8
qs_3_scaffold_751_18
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(16914..18020)
DNA (1107bp) protein (369aa)
Histidine kinase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JRI5_NATP1
signal transduction histidine kinase
Histidine kinase {ECO:0000313|EMBL:ELY71603.1}; Signal transduction histidine kinase {ECO:0000313|EMBL:AGB33237.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natri
qs_3_scaffold_751_19
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18274..19143)
DNA (870bp) protein (290aa)
trmU; tRNA methyl transferase (EC:2.1.1.61)
tRNA methyl transferase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K2Q7_9EURY
tRNA methyl transferase {ECO:0000313|EMBL:EMA14409.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
qs_3_scaffold_751_20
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19241..19825)
DNA (585bp) protein (195aa)
Isochorismatase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KS45_9EURY
isochorismatase hydrolase
Isochorismatase {ECO:0000313|EMBL:EMA24046.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 13557.;"
qs_3_scaffold_751_21
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19822..20649)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V0K3_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF25210.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qs_3_scaffold_751_22
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20965..21435
DNA (471bp) protein (157aa)
Homolog to DNA topoisomerase I n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTB7_NATM8
homolog to DNA topoisomerase I
Homolog to DNA topoisomerase 1 {ECO:0000313|EMBL:CCQ37684.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
qs_3_scaffold_751_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21507..23453
DNA (1947bp) protein (649aa)
endA; tRNA splicing endonuclease (EC:3.1.27.9)
tRNA-splicing endonuclease {ECO:0000255|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000255|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000255|HAMAP-Rule:MF_01834}; TaxID=348780 species="Archaea;
tRNA-splicing endonuclease n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=ENDA_NATPD
Displaying 24 items

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