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qs_3_scaffold_1004

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_1004_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..108)
DNA (108bp) protein (36aa)
Transposase {ECO:0000313|EMBL:EMA46034.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
qs_3_scaffold_1004_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(281..1486)
DNA (1206bp) protein (402aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZ19_9EURY
qs_3_scaffold_1004_3
unknown

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1703..1807
DNA (105bp) protein (35aa)

This feature has no annotations

qs_3_scaffold_1004_4
unknown

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2018..2215
DNA (198bp) protein (66aa)

This feature has no annotations

qs_3_scaffold_1004_5
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2217..2666
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=B0R9F7_HALS3
hypothetical protein
Vng6401h {ECO:0000313|EMBL:AAG21010.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (strain ATCC 7009
qs_3_scaffold_1004_6

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comp(2700..3059)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YEH3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS11451.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
qs_3_scaffold_1004_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3398..4711)
DNA (1314bp) protein (438aa)
Alcohol dehydrogenase, class IV n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M1D1_9EURY
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:EMA38409.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameline
alcohol dehydrogenase, class IV
qs_3_scaffold_1004_8
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4914..5162)
DNA (249bp) protein (83aa)
hypothetical protein id=24619044 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Uncharacterized protein {ECO:0000313|EMBL:ERH06456.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
hypothetical protein
qs_3_scaffold_1004_9
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5402..6865)
DNA (1464bp) protein (488aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_0
Probable 3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MWT7_HALMO
3-phosphoshikimate 1-carboxyvinyltransferase
qs_3_scaffold_1004_10
unknown

Not on your lists

comp(6926..7165)
DNA (240bp) protein (80aa)

This feature has no annotations

qs_3_scaffold_1004_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7306..7665
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CDX6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20853.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_3_scaffold_1004_12

Not on your lists

7818..8087
DNA (270bp) protein (90aa)
Growth inhibitor n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y9W9_9ARCH
Growth inhibitor {ECO:0000313|EMBL:ESS07922.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
qs_3_scaffold_1004_13
unknown

Not on your lists

comp(8347..8781)
DNA (435bp) protein (145aa)

This feature has no annotations

qs_3_scaffold_1004_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(8788..9819)
DNA (1032bp) protein (344aa)
id=24635639 bin=Halorubrum_J07HR59 tax=Halorubrum_J07HR59
Hemolysin III Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
qs_3_scaffold_1004_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10196..10696
DNA (501bp) protein (167aa)
ATP-dependent helicase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NE42_9EURY
ATP-dependent helicase {ECO:0000313|EMBL:EMA56252.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
DEAD/DEAH box helicase domain protein
qs_3_scaffold_1004_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10761..11891)
DNA (1131bp) protein (377aa)
degP; probable periplasmic serine protease (EC:3.4.21.-)
Periplasmic serine proteinase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDC4_9EURY
Periplasmic serine proteinase {ECO:0000313|EMBL:EMA55079.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
qs_3_scaffold_1004_17
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12121..13371
DNA (1251bp) protein (417aa)
Peptidase M24 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2P0_HALJB
X-Pro aminopeptidase
Peptidase M24 {ECO:0000313|EMBL:ELY34987.1}; X-Pro aminopeptidase {ECO:0000313|EMBL:ADJ14997.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkal
qs_3_scaffold_1004_18
unknown

Not on your lists

comp(13444..13854)
DNA (411bp) protein (137aa)

This feature has no annotations

qs_3_scaffold_1004_19
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14079..14933)
DNA (855bp) protein (285aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9T7_HALJB
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase {ECO:0000313|EMBL:ADJ16426.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalk
qs_3_scaffold_1004_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15177..16193
DNA (1017bp) protein (339aa)
prephenate dehydrogenase n=1 Tax=Halomicrobium katesii RepID=UPI0003779EF4
prephenate dehydrogenase
Prephenate dehydrogenase {ECO:0000313|EMBL:ACV48469.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_3_scaffold_1004_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16330..17244
DNA (915bp) protein (305aa)
Methyltransferase type 12 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRY6_9EURY
Methyltransferase type 12 {ECO:0000313|EMBL:ELZ24291.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
methyltransferase family protein
Displaying 21 items

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