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qs_3_scaffold_1115

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_1115_1
unknown

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1..93
DNA (93bp) protein (31aa)

This feature has no annotations

qs_3_scaffold_1115_2
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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193..471
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0D5H0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30741.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
hypothetical protein
qs_3_scaffold_1115_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(742..1254)
DNA (513bp) protein (171aa)
Cobalt ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJY6_9EURY
Cobalt ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA44770.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
cbiO5; ABC-type transport system ATP-binding protein (probable substrate cobalt/nickel/biotin)
qs_3_scaffold_1115_4
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1251..2051)
DNA (801bp) protein (267aa)
cbiQ5; cobalt ABC transporter permease; K02008 cobalt/nickel transport system permease protein id=24622025 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Cobalt ABC transporter, permease protein CbiQ {ECO:0000313|EMBL:ERH00429.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotiu
cbiQ2; ABC-type transport system permease protein (probable substrate cobalt/nickel/biotin)
qs_3_scaffold_1115_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2065..2355)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXJ1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38166.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
ABC-type transport system small membrane protein (probable substrate cobalt/nickel/biotin)
qs_3_scaffold_1115_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2355..3041)
DNA (687bp) protein (229aa)
ABC-type transport system permease protein (Probable substrate cobalt/nickel/biotin) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRF8_NATM8
cbiM; ABC-type transport system permease protein (probable substrate cobalt/nickel/biotin)
ABC-type transport system permease protein (Probable substrate cobalt/nickel/biotin) {ECO:0000313|EMBL:CCQ36794.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
qs_3_scaffold_1115_7
unknown

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comp(3099..3353)
DNA (255bp) protein (85aa)

This feature has no annotations

qs_3_scaffold_1115_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3635..3991
DNA (357bp) protein (119aa)
Putative nickel-responsive regulator n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSS3_9EURY
Putative nickel-responsive regulator {ECO:0000256|HAMAP-Rule:MF_00476}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
nickel-responsive regulator
qs_3_scaffold_1115_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4055..5008)
DNA (954bp) protein (318aa)
Phosphate transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3M8_9EURY
Phosphate transporter {ECO:0000313|EMBL:EMA52476.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 89
phosphate/sulfate permease
qs_3_scaffold_1115_10
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5464..5904
DNA (441bp) protein (147aa)
phosphoribosyl-AMP cyclohydrolase; K01496 phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] id=24652510 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021};; TaxID=1085029 species="Archaea; Eu
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
qs_3_scaffold_1115_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5907..7061
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGN2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44493.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_3_scaffold_1115_12
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7320..8690)
DNA (1371bp) protein (457aa)
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase {ECO:0000313|EMBL:AEH35846.1}; EC=5.4.2.10 {ECO:0000313|EMBL:AEH35846.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.
Phosphoglucosamine mutase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6U9_HALXS
qs_3_scaffold_1115_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8867..9703
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDN5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43856.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_3_scaffold_1115_14
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10151..10981
DNA (831bp) protein (277aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MDT4_HALMO
ribose-phosphate pyrophosphokinase
qs_3_scaffold_1115_15
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11112..11384)
DNA (273bp) protein (91aa)
Isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=797210 species="Archaea; Eu
Isoleucine--tRNA ligase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DB76_HALXS
Displaying 15 items

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