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qs_3_scaffold_1207

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_1207_1
unknown

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3..92
DNA (90bp) protein (30aa)

This feature has no annotations

qs_3_scaffold_1207_2
Pyrobaculum arsenaticum, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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456..662
DNA (207bp) protein (69aa)
DNA polymerase, beta domain protein region {ECO:0000313|EMBL:ABP49865.1}; TaxID=340102 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobacu
qs_3_scaffold_1207_3
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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945..2141
DNA (1197bp) protein (399aa)
ABC transporter substrate-binding protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HRN6_9EURY
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELZ87151.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elon
ThiB subfamily ABC transporter periplasmic binding protein
qs_3_scaffold_1207_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2298..4169
DNA (1872bp) protein (624aa)
ABC transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP59_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ23664.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
ABC transporter
qs_3_scaffold_1207_5
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4171..5340
DNA (1170bp) protein (390aa)
ABC transporter n=1 Tax=Halogranum salarium B-1 RepID=J3A3H7_9EURY
ABC transporter {ECO:0000313|EMBL:EJN59943.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ABC transporter
qs_3_scaffold_1207_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5440..6120)
DNA (681bp) protein (227aa)
probable S-adenosylmethionine-dependent methyltransferase (homolog to 24-sterol C-methyltransferase) (EC:2.1.1.-)
S-adenosylmethionine-dependent methyltransferase 3 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M593_9EURY
S-adenosylmethionine-dependent methyltransferase 3 {ECO:0000313|EMBL:EMA40977.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
qs_3_scaffold_1207_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6505..6954
DNA (450bp) protein (150aa)
Conserved hypothetical membrane protein (DUF2391) n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PPZ1_9EURY
conserved hypothetical membrane protein (DUF2391)
Conserved hypothetical membrane protein (DUF2391) {ECO:0000313|EMBL:CCQ34114.1}; Putative integral membrane protein {ECO:0000313|EMBL:ERJ07337.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Haloba
qs_3_scaffold_1207_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7056..7550
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDK6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42754.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_3_scaffold_1207_9
unknown

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7649..8281
DNA (633bp) protein (211aa)

This feature has no annotations

qs_3_scaffold_1207_10
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8404..9189)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MG40_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA44323.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qs_3_scaffold_1207_11
unknown

Not on your lists

comp(9189..9278)
DNA (90bp) protein (30aa)

This feature has no annotations

qs_3_scaffold_1207_12
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9383..9979)
DNA (597bp) protein (199aa)
DNA damage-inducible protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNX5_9EURY
MATE efflux family protein
DNA damage-inducible protein {ECO:0000313|EMBL:ERJ05362.1}; MATE efflux family protein {ECO:0000313|EMBL:CCQ33632.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qs_3_scaffold_1207_13
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10919..11923)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XCX6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY59549.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
Zn-ribbon containing protein (DUF2072)
qs_3_scaffold_1207_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11928..12356)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBG8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42693.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_3_scaffold_1207_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12360..12992)
DNA (633bp) protein (211aa)
GTP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MA72_9EURY
GTP-binding protein {ECO:0000313|EMBL:EMA42692.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
small GTP-binding protein domain
qs_3_scaffold_1207_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13918..15732
DNA (1815bp) protein (605aa)
ORC1-type DNA replication protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1F2_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
orc1/cdc6 family replication initiation protein
qs_3_scaffold_1207_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15929..17089
DNA (1161bp) protein (387aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2X8_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA39758.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
short-chain dehydrogenase/reductase SDR
qs_3_scaffold_1207_18
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16941..17657)
DNA (717bp) protein (239aa)
Signal peptidase I n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3ACT1_9EURY
Signal peptidase I {ECO:0000313|EMBL:GAD52583.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
sec11a; signal sequence peptidase
qs_3_scaffold_1207_19
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17757..18974
DNA (1218bp) protein (406aa)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=931277 species="Archaea; Euryar
DNA polymerase ii small subunit (EC:2.7.7.7)
DNA polymerase II small subunit n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MEZ1_HALMO
Displaying 19 items

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