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qs_3_scaffold_1377

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_1377_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..250)
DNA (249bp) protein (83aa)
50S ribosomal protein L32e n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHG5_9EURY
50S ribosomal protein L32e {ECO:0000313|EMBL:EMA44134.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
rpl32R; 50S ribosomal protein L32e
qs_3_scaffold_1377_2
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(240..854)
DNA (615bp) protein (205aa)
50S ribosomal protein L6P n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W687_9EURY
rpl6p; 50S ribosomal protein L6P
50S ribosomal protein L6P {ECO:0000313|EMBL:AGN02182.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk
qs_3_scaffold_1377_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(882..1274)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS8_NATPD
rps8p; 30S ribosomal protein S8P
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
qs_3_scaffold_1377_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1300..1485)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRP5_9EURY
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ham
rps14P; 30S ribosomal protein S14P
qs_3_scaffold_1377_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1485..2066)
DNA (582bp) protein (194aa)
50S ribosomal protein L5 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HE16_9EURY
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus H
50S ribosomal protein L5
qs_3_scaffold_1377_6
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2063..2887)
DNA (825bp) protein (275aa)
30S ribosomal protein S4e n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JBW8_HALVA
30S ribosomal protein S4E
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA111
qs_3_scaffold_1377_7
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2884..3282)
DNA (399bp) protein (133aa)
50S ribosomal protein L24P n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIY0_HALMO
50S ribosomal protein L24P {ECO:0000313|EMBL:AKH98255.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum
rpl24; 50S ribosomal protein L24
qs_3_scaffold_1377_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3282..3680)
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y033_NATM8
rpl14; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
qs_3_scaffold_1377_9
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3677..4135)
DNA (459bp) protein (153aa)
30S ribosomal protein S17P n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MF82_HALMO
30S ribosomal protein S17P {ECO:0000313|EMBL:EMA44402.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1
rps17p; 30S ribosomal protein S17
qs_3_scaffold_1377_10
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4126..4533)
DNA (408bp) protein (136aa)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754, ECO:0000313|EMBL:EMA05013.1}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_
rnp1; ribonuclease P protein component 1 (EC:3.1.26.5)
Ribonuclease P protein component 1 n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0J9M8_9EURY
qs_3_scaffold_1377_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(4530..4769)
DNA (240bp) protein (80aa)
50S ribosomal protein L29P n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHF6_9EURY
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
rpmC; 50S ribosomal protein L29P
qs_3_scaffold_1377_12
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(4772..5791)
DNA (1020bp) protein (340aa)
30S ribosomal protein S3 n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A628_9EURY
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;
rps3p; 30S ribosomal protein S3P
qs_3_scaffold_1377_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(5791..6288)
DNA (498bp) protein (166aa)
50S ribosomal protein L22P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWC8_9EURY
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
50S ribosomal protein L22
qs_3_scaffold_1377_14
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(6349..6771)
DNA (423bp) protein (141aa)
30S ribosomal protein S19P n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7M9_9EURY
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
rps19p; 30S ribosomal protein S19P
qs_3_scaffold_1377_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(6771..7487)
DNA (717bp) protein (239aa)
50S ribosomal protein L2 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N6F7_9EURY
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
rpl2p; 50S ribosomal protein L2P
qs_3_scaffold_1377_16
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(7489..7740)
DNA (252bp) protein (84aa)
50S ribosomal protein L23P n=1 Tax=Halogranum salarium B-1 RepID=J3EVL2_9EURY
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
50S ribosomal protein L23
qs_3_scaffold_1377_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(7731..8480)
DNA (750bp) protein (250aa)
50S ribosomal protein L4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFI0_9EURY
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
50S ribosomal protein L4P
qs_3_scaffold_1377_18
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(8477..9496)
DNA (1020bp) protein (340aa)
50S ribosomal protein L3 n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DFG6_9EURY
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;
50S ribosomal protein L3
Displaying 18 items

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