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qs_3_scaffold_1475

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_1475_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..273
DNA (273bp) protein (91aa)
Receiver/sensor box histidine kinase {ECO:0000313|EMBL:CAI48404.2}; EC=2.7.13.3 {ECO:0000313|EMBL:CAI48404.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
Receiver/sensor box histidine kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITX9_NATPD
signal-transducing histidine kinase/response regulator
qs_3_scaffold_1475_2
unknown

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572..877
DNA (306bp) protein (102aa)

This feature has no annotations

qs_3_scaffold_1475_3
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(907..1887)
DNA (981bp) protein (327aa)
A/G-specific DNA glycosylase (EC:3.2.2.-)
HhH-GPD family protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C3J5_9EURY
HhH-GPD family protein {ECO:0000313|EMBL:ELZ17238.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.
qs_3_scaffold_1475_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2014..2340
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWV5_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48315.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_3_scaffold_1475_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2395..3000)
DNA (606bp) protein (202aa)
NUDIX hydrolase family protein (EC:3.6.1.13)
Mut/nudix family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1R9_9EURY
Mut/nudix family protein {ECO:0000313|EMBL:EMA51468.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis J
qs_3_scaffold_1475_6
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3067..3558)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C8L0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDE57150.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
putative transcriptional regulator
qs_3_scaffold_1475_7
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3564..3770)
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=B0R8J3_HALS3
Uncharacterized protein {ECO:0000313|EMBL:ELZ58525.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
qs_3_scaffold_1475_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4152..5654)
DNA (1503bp) protein (501aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=122745
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNR2_9EURY
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
qs_3_scaffold_1475_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5654..6001)
DNA (348bp) protein (116aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK43_9EURY
glutamyl-tRNA amidotransferase subunit C
qs_3_scaffold_1475_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6035..6517
DNA (483bp) protein (161aa)
NUDIX hydrolase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J2S8_HALJB
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADJ15035.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (strai
qs_3_scaffold_1475_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6623..7168
DNA (546bp) protein (182aa)
Molecular chaperone DnaJ n=3 Tax=Halococcus hamelinensis RepID=M0M6T9_9EURY
Molecular chaperone DnaJ {ECO:0000313|EMBL:EMA41507.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 10
heat shock protein DnaJ domain-containing protein
qs_3_scaffold_1475_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7422..8117
DNA (696bp) protein (232aa)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_01419}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_01419};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_01419};; EC=3.1.3.18 {ECO:0000256|HAMAP-Rule:MF_01
Phosphoglycolate phosphatase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M832_9EURY
SPP-like hydrolase
qs_3_scaffold_1475_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8196..8891)
DNA (696bp) protein (232aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; TaxID=797114 species
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Halomicrobium katesii RepID=UPI000367D1CA
3,4-dihydroxy-2-butanone 4-phosphate synthase
qs_3_scaffold_1475_14
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8893..9651)
DNA (759bp) protein (253aa)
Riboflavin kinase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W857_9EURY
riboflavin kinase
Riboflavin kinase {ECO:0000313|EMBL:AGN01508.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
qs_3_scaffold_1475_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9894..10604
DNA (711bp) protein (237aa)
MaoC domain-containing protein dehydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9M5_9EURY
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:EMA42451.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
MaoC domain-containing protein dehydratase
qs_3_scaffold_1475_16
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10740..10976
DNA (237bp) protein (79aa)
AbrB family transcription regulator id=24630686 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:ERG92979.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="H
transcriptional regulator, AbrB family
qs_3_scaffold_1475_17
unknown

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11008..11082
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 17 items

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