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qs_3_scaffold_1776

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_1776_1
unknown

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1..129
DNA (129bp) protein (43aa)

This feature has no annotations

qs_3_scaffold_1776_2
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(213..479)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3C1_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15228.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_3_scaffold_1776_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(613..1446)
DNA (834bp) protein (278aa)
Homolog to KaiC-like transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMU9_NATPD
KaiC-like transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:CAI50557.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_3_scaffold_1776_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1561..2316)
DNA (756bp) protein (252aa)
GHMP kinase putative ATP-binding protein n=1 Tax=Halogranum salarium B-1 RepID=J3JEP9_9EURY
GHMP kinase putative ATP-binding protein {ECO:0000313|EMBL:EJN58556.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
beta-ribofuranosylaminobenzene 5'-phosphate synthase family
qs_3_scaffold_1776_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2599..3777)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6L9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53491.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_3_scaffold_1776_6

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4031..5800
DNA (1770bp) protein (590aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=756883 species="Archaea.;" source="halo
Dihydroxy-acid dehydratase n=1 Tax=halophilic archaeon DL31 RepID=G2MKR3_9ARCH
qs_3_scaffold_1776_7
unknown

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comp(6063..6314)
DNA (252bp) protein (84aa)

This feature has no annotations

qs_3_scaffold_1776_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6412..6837)
DNA (426bp) protein (142aa)
DNA binding domain-containing protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWW2_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EFW90765.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
DNA binding domain-containing protein
qs_3_scaffold_1776_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7138..7719
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1P262_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10755.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_3_scaffold_1776_trna_1
unknown

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comp(8149..8221)
DNA (73bp)
transferRNA
qs_3_scaffold_1776_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8395..9111
DNA (717bp) protein (239aa)
Mechanosensitive ion channel protein MscS n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBL8_9EURY
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:EMA55261.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
mscS; mechanosensitive ion channel
qs_3_scaffold_1776_11
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8994..10259)
DNA (1266bp) protein (422aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B n=1 Tax=Halorubrum sp. J07HR59 RepID=U1P1N7_9EURY
rRNA pseudouridine synthase, putative
qs_3_scaffold_1776_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10401..10976)
DNA (576bp) protein (192aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS00054797}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00239};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00239, ECO:0000256|SAAS:SAAS0005
cmk2; cytidylate kinase (EC:2.7.4.25)
Cytidylate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9L0_9EURY
qs_3_scaffold_1776_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11099..12067)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23468.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_3_scaffold_1776_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12186..12836)
DNA (651bp) protein (217aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCU3_9EURY
qs_3_scaffold_1776_15
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13072..14091
DNA (1020bp) protein (340aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
Uroporphyrinogen decarboxylase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PKR1_9EURY
qs_3_scaffold_1776_16
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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14277..15341
DNA (1065bp) protein (355aa)
Histidine kinase n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BTX3_9EURY
hypothetical protein
Histidine kinase {ECO:0000313|EMBL:ELZ13853.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
Displaying 17 items

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