ggKbase home page

qs_3_scaffold_1960

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_1960_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..687
DNA (687bp) protein (229aa)
nuoL; NADH dehydrogenase-like complex subunit L (EC:1.6.5.-)
Proton-translocating NADH-quinone oxidoreductase subunit L n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MXC6_9EURY
Proton-translocating NADH-quinone oxidoreductase subunit L {ECO:0000313|EMBL:EMA50392.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
qs_3_scaffold_1960_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1140..2204
DNA (1065bp) protein (355aa)
nuoM; NADH dehydrogenase-like complex subunit M (EC:1.6.5.-)
Proton-translocating NADH-quinone oxidoreductase subunit M n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M960_HALMO
Proton-translocating NADH-quinone oxidoreductase subunit M {ECO:0000313|EMBL:EMA42281.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" s
qs_3_scaffold_1960_3
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2204..3115
DNA (912bp) protein (304aa)
nuoN; NADH dehydrogenase, subunit N (ubiquinone) (EC:1.6.5.3)
NADH dehydrogenase, subunit N (Ubiquinone) n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HPA8_9EURY
NADH dehydrogenase, subunit N (Ubiquinone) {ECO:0000313|EMBL:ELZ84263.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax lar
qs_3_scaffold_1960_4
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3118..3555
DNA (438bp) protein (146aa)
Proton-translocating NADH-quinone oxidoreductase, chain N n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MZY3_9EURY
Proton-translocating NADH-quinone oxidoreductase, chain N {ECO:0000313|EMBL:EMA42280.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" so
nuoN; NADH dehydrogenase-like complex, subunit N
qs_3_scaffold_1960_5
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3764..4042)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VSF2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00140.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
qs_3_scaffold_1960_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4129..4341)
DNA (213bp) protein (71aa)
Surface glycoprotein n=1 Tax=Halogranum salarium B-1 RepID=J3JI03_9EURY
Surface glycoprotein {ECO:0000313|EMBL:EJN61449.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
csg2; surface glycoprotein
qs_3_scaffold_1960_7
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4544..5998
DNA (1455bp) protein (485aa)
menF; menaquinone-specific isochorismate synthase (EC:5.4.4.2)
Menaquinone-specific isochorismate synthase n=2 Tax=Haloarcula RepID=M0JS89_9EURY
Menaquinone-specific isochorismate synthase {ECO:0000313|EMBL:EMA12002.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcu
qs_3_scaffold_1960_8
unknown

Not on your lists

comp(6314..6919)
DNA (606bp) protein (202aa)

This feature has no annotations

qs_3_scaffold_1960_9
unknown

Not on your lists

comp(7010..7474)
DNA (465bp) protein (155aa)

This feature has no annotations

qs_3_scaffold_1960_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7545..7910
DNA (366bp) protein (122aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4Z4_9EURY
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
qs_3_scaffold_1960_11
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8128..8247
DNA (120bp) protein (40aa)
Uncharacterized protein {ECO:0000313|EMBL:ELZ36761.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
qs_3_scaffold_1960_12
unknown

Not on your lists

8789..8908
DNA (120bp) protein (40aa)

This feature has no annotations

qs_3_scaffold_1960_13
unknown

Not on your lists

comp(8851..8979)
DNA (129bp) protein (43aa)

This feature has no annotations

qs_3_scaffold_1960_14
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9051..9725)
DNA (675bp) protein (225aa)
ABC-type proline/glycine betaine transport system, permease component n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1NMP3_9EURY
ABC-type proline/glycine betaine transport system, permease component {ECO:0000313|EMBL:ERG98690.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloqua
binding-protein-dependent transport systems inner membrane component
qs_3_scaffold_1960_15
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9727..10485)
DNA (759bp) protein (253aa)
ABC transporter n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XRM2_9EURY
ABC transporter {ECO:0000313|EMBL:ELY63283.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
ABC transporter
Displaying 15 items

View Taxonomy