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qs_3_scaffold_2024

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_3_scaffold_2024_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..397
DNA (396bp) protein (132aa)
Heat shock protein DnaJ domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M1H6_9EURY
Heat shock protein DnaJ domain-containing protein {ECO:0000313|EMBL:EMA39273.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
heat shock protein DnaJ domain-containing protein
qs_3_scaffold_2024_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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736..2073
DNA (1338bp) protein (446aa)
Nucleotidyl transferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MS82_HALMO
Nucleotidyl transferase {ECO:0000313|EMBL:EMA48471.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
nucleotidyl transferase
qs_3_scaffold_2024_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2076..3683
DNA (1608bp) protein (536aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|H
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N2W6_9EURY
glucosamine-fructose-6-phosphate aminotransferase
qs_3_scaffold_2024_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3906..5069
DNA (1164bp) protein (388aa)
UDP-sulfoquinovose synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR82_9EURY
UDP-sulfoquinovose synthase {ECO:0000313|EMBL:EMA46965.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
sqdB; UDP-sulfoquinovose synthase
qs_3_scaffold_2024_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5104..6006
DNA (903bp) protein (301aa)
UDP-glucose 4-epimerase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDA1_9EURY
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EMA55513.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
galE5; UDP-glucose 4-epimerase
qs_3_scaffold_2024_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6003..6980
DNA (978bp) protein (326aa)
UDP-glucose 4-epimerase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRS8_9EURY
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EMA36181.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
galE7; UDP-glucose 4-epimerase
qs_3_scaffold_2024_7
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7063..7674
DNA (612bp) protein (204aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000255|HAMAP-Rule:MF_00587};; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobact
tRNA (pseudouridine(54)-N(1))-methyltransferase n=2 Tax=Haloarcula RepID=TRMY_HALMA
hypothetical protein
qs_3_scaffold_2024_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7674..8030
DNA (357bp) protein (119aa)
Zinc finger CHY domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQE0_9EURY
Zinc finger CHY domain protein {ECO:0000313|EMBL:EMA46959.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
hypothetical protein
qs_3_scaffold_2024_trna_1
unknown

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8101..8173
DNA (73bp)
transferRNA
qs_3_scaffold_2024_9
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8359..9177)
DNA (819bp) protein (273aa)
Aldo/keto reductase family oxidoreductase n=2 Tax=Haloarcula hispanica RepID=G0HYD7_HALHT
mocA; aldo/keto reductase family oxidoreductase
Aldo/keto reductase family oxidoreductase {ECO:0000313|EMBL:AEM58129.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
qs_3_scaffold_2024_10
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9220..10485
DNA (1266bp) protein (422aa)
Amidohydrolase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXU7_9EURY
Amidohydrolase {ECO:0000313|EMBL:ELZ28041.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.
amidohydrolase
qs_3_scaffold_2024_11

Not on your lists

10585..11097
DNA (513bp) protein (171aa)
Cupin domain protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y6F3_9ARCH
Cupin domain protein {ECO:0000313|EMBL:ESS10438.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
qs_3_scaffold_2024_12
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11168..11710)
DNA (543bp) protein (181aa)
glpQ1; glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KGD3_HALAR
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EMA19224.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarc
Displaying 13 items

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